Clupea harengus (Atlantic herring): 105910135
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Entry
105910135 CDS
T09045
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105910135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105910135
03036 Chromosome and associated proteins [BR:
char03036
]
105910135
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105910135
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
105910135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
105910135
NCBI-ProteinID:
XP_031434913
Ensembl:
ENSCHAG00000013675
UniProt:
A0A6P8G5K3
LinkDB
All DBs
Position
13:complement(15845448..15863546)
Genome browser
AA seq
1229 aa
AA seq
DB search
MAEAVAEMCDQLIKAVNVMMDPESSQRYRLEALKFCEEFKEKCPFCVQCGLQLSERTQNP
IIRHFGLQILEHVIKFRWNNMSQQEKVHLKNCAMDLLSKGTHPILKEESHIKDALSRIVV
EMVKREWPQHWPDLLKELETLTTLGEAQAELVMLILLRLAEDVITFQTLPTQRRRDIQQT
LTQNMDGVFSFLLTVLQLNVDNYRKLKGVAGEELKAMAHCRVGVATLNTLAGYIDWVAMV
HITNGNCRLLEVLCLLLSEPELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYILS
AAQSADGAAICNQSSTRTYKTSGVVERHYTFLKRLCQVLSALGSQLCSLVGSAAEVDVPR
NLNKYIEAFLAFTTHPSQFLKSSTQITWGTLFRHEVLSKDPVVIKMAVKYLRETMTNLVK
TGFPSKKDSPSCEYSRGDFDSDEDFNSFFNSFRAQQGEVVRLACRIVPKEAFLITSEWLQ
YQIMTPIDTGNTTSKIGEGLCSILSPSAVQWDAMTFFTESVLGQLFKVLDKERLPIEQGI
ELLQMVVSFDTHDPLILSCVLTNVSSLFPFATHQPQILPQVLAKLFAAITFEVLEENKTP
RTRAVKNVRRHACSSIVKMCRDYPQLILPCFDMLYAHVKKLFCNELLLTQMEKCALMEAL
VLISNQFTDFSKQEAFLEELMSPVRTRWLSEEMSSVLWDPALFLAHVGADQVINDPSSED
QFGISRSRISFCVYTLMGVVKRARWPADPQKAHAGGFVVGQSANGDPIYRNPCTTQVLAL
LPNLLGLIRTHNSLFSPENMARHSETFIRVHEVMDVEKNLVLGLPQPVLDIYDSPVYKTA
LERMQGFFCTLYDNCFHVLGNLGPSLTQDFYTIDGLALQISNSVLSNLDNVPDHRLRPLL
RVFMKQLVVSCPPEYHESLLCPLLGPVFAYMLQRLTLRWQIINQRSSLGGSEEESLILEE
TQVTQEMLEEQLVRIVTRELLDLIIVSCISRKVPEPVGSKEETADNDDEMMATDASQGIQ
MNSATSVDELTDLGKCLLKHEDIYMTLLTIAFTAVSWKDTSICHRTASLVCWTLLRQVVG
GNLLPEAVTWLYVSVLKGLQIHGQHEGSNATLTQLALFMYENLRARYVELRGVMTQIPNI
QQEALDQFDHRILNPAANKVTEKKRKEQFKKLIAGAIGKPLGQQFKKEVHIRNLPSLFKA
GKADTKRDLLENNETTGLTALFCPQQEDV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcagtcgcagaaatgtgcgatcagctaattaaagctgttaacgtaatgatg
gatcctgaatcgagccaacgatatcgcctggaggcccttaagttctgtgaagagtttaaa
gaaaagtgtcccttctgtgtccagtgtggccttcaattgtcagagaggacacaaaatcct
atcattaggcattttggtcttcaaattttggaacatgtcatcaagtttcgatggaacaat
atgtcacagcaggagaaagtccacttaaaaaattgtgccatggacctcttatcaaaggga
acacatcctatcttaaaggaagaaagtcacattaaggatgccttgtctcgtattgttgtg
gaaatggtcaagagagagtggcctcagcactggccagacttgctgaaagaactggagaca
cttactactttgggagaggctcaagcagagctggtgatgctgattcttttacgactggcc
gaggacgtgattacatttcagacactgcccacacagaggcggcgggacatccagcaaacc
ctaacccagaatatggatggcgtcttcagtttcctgctgactgtcctgcagctcaatgtg
gacaactaccgcaaactgaaaggtgttgctggcgaagagctgaaggctatggctcattgt
cgagtgggtgtggctactctaaacacactggctggttatatagattgggtggcgatggtg
cacatcactaatgggaactgccgtctccttgaggtgttgtgcctgctgctgagtgaaccg
gagctccagctggaggcagcagagtgtctactcatcgccatcagcagaaaggggaaactg
gaggataggaagcctctcatggtgctgtttgatgatgtcgccatgcattacatcctttct
gcagcacagtctgcagatggggcagctatctgcaaccaatcctctacgagaacgtataag
acaagtggggttgtggagaggcattacaccttcctgaagaggctgtgtcaggtgctctcc
gccttaggaagccagctgtgttcactggtgggttctgctgctgaagttgacgtaccccgg
aatctgaataagtacatagaggcctttcttgccttcactactcatcccagtcagttcctg
aaatcttcgacccaaattacctggggaaccttgtttaggcacgaggtcctctcaaaggat
cctgttgttatcaagatggctgtgaagtacttgagggagaccatgacaaaccttgtaaag
acagggttcccttccaagaaagacagccctagctgtgagtactcccggggcgactttgac
agcgatgaggacttcaactctttcttcaactctttcagggctcaacagggcgaggttgtc
cgtttggcatgtcggatagtgcctaaggaggcatttctgatcaccagtgaatggctacaa
taccagatcatgactcccatcgacacaggaaatacaacatccaagataggggaaggtcta
tgctccattctctctccttctgcagtgcaatgggatgcaatgaccttcttcactgagagt
gtgttgggtcagcttttcaaagttctggacaaagagagacttcctattgaacagggcatt
gagctgctccaaatggtggtgtcctttgacacgcatgaccccctcattttgtcctgtgtc
ctcaccaacgtctcctccctcttcccgttcgccacgcaccagccacagattctgcctcag
gtgctcgctaagctgtttgctgccattacattcgaggtgttggaagaaaacaagacaccc
cgcacgcgagctgtgaagaatgttagaagacatgcctgttcttccattgtcaagatgtgt
cgggactatccacagctcatcctgccatgctttgacatgctctacgcacatgtgaagaag
ctgttctgcaatgagctgctactgactcagatggagaaatgtgccctgatggaagcgctg
gttctgatcagtaaccagtttacagactttagtaagcaggaggcttttctggaagagctc
atgtctccagtcagaacccgctggctctcggaggagatgagtagtgttctgtgggaccct
gccctatttctggctcatgttggtgctgatcaggtcatcaatgaccccagcagtgaggat
cagtttggcatcagtcgctcacggatcagtttctgtgtatatacactgatgggtgtggtg
aagcgtgcccgctggccagctgatccccaaaaggcccacgcaggggggtttgtggtgggc
caaagcgctaatggagaccctatctaccggaacccctgcaccactcaggtcttggcactt
ctacccaatctccttggactcatcaggacccataatagcttgttctcaccagagaacatg
gctcgccacagtgagactttcatcagagtacatgaggtcatggatgtggaaaagaattta
gtactgggcctgccgcaacctgtgctggatatttatgactccccggtgtacaagacggct
ctggagcgcatgcaaggcttcttctgtaccctgtatgataactgttttcatgtgctgggg
aacctgggcccctccctcacgcaagacttctacaccattgatgggctggcccttcagatc
agcaactctgttctcagtaatctagataatgttcctgaccacagactacgccctttgctc
cgggtgttcatgaagcagctggtcgtttcctgtcctccggagtatcatgagtctctactc
tgccccctgctggggcctgtctttgcgtacatgctgcagagacttaccttgaggtggcag
atcatcaaccagcggagtagtctggggggctcagaagaggagagtctgatcttggaagag
acgcaggtaactcaagaaatgttggaggaacaactggtgcgcattgtgaccagggagctc
ctagatctgatcattgtttcgtgtatatcaagaaaagtccctgagcccgtaggaagcaaa
gaggagacggcagataatgatgatgagatgatggcaacagatgcgtctcagggtatccag
atgaattctgctacctctgtagatgagcttaccgatcttgggaagtgcttgctcaaacat
gaggacatttacatgactcttctgactattgccttcaccgctgtgtcttggaaagacaca
agtatctgccaccgcactgcctctctggtttgctggactctccttcgacaggtggtcggg
gggaacctgttgccagaggcagtgacatggctgtatgtcagtgtgctgaagggattgcag
attcacggccaacatgagggctctaacgccaccctcacacagctcgcactcttcatgtat
gagaacctgagagcacgctatgtggaactacggggagtcatgactcagatccccaacatc
cagcaggaggccctggaccagtttgaccacaggatcctgaaccctgctgctaataaggtc
acggagaagaagaggaaagagcagttcaagaagcttattgctggtgctattgggaaacct
ttgggccagcagtttaaaaaagaggtgcatatacgcaaccttccatctctcttcaaagcg
ggtaaggctgacaccaaaagggaccttctggagaataacgagaccactggcctgaccgca
ctcttctgccctcagcaagaggatgtctga
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