Clupea harengus (Atlantic herring): 105910196
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Entry
105910196 CDS
T09045
Symbol
tecpr1a
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 1 isoform X4
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105910196 (tecpr1a)
03029 Mitochondrial biogenesis [BR:
char03029
]
105910196 (tecpr1a)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Others
105910196 (tecpr1a)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
105910196 (tecpr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
PH
Unpaired
Motif
Other DBs
NCBI-GeneID:
105910196
NCBI-ProteinID:
XP_012694335
Ensembl:
ENSCHAG00000009270
UniProt:
A0A6P3WBF1
LinkDB
All DBs
Position
23:11436581..11455007
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AA seq
1239 aa
AA seq
DB search
MPSSLLWAVDVYGRVYSLSTACQLWEQCRDAHLEFKRVTSVQQCCWGIACDHNIYLNVHA
SDLPIRYQEETFENQRWNPVDGFSDRLLPSDRWQWSDVTGLDHQPLESFQLPSESWEWEG
DWYADENIGGEPTDKTGWTYAIDFPATYTKDKKWNSCVRRRRWIRYRRYKARDTWAKIPS
EETGPLPDPFSDISCGGWEVSEEPAGRLSLWAVSLQGKVWFRDGIRHDNPEGSVWEEVSI
PGEVVQISCGPVDLVWAVLWEGQLLVREGIGRDCPKGSSWVVVDSPSPEVGAIHVAVGVN
VVWAITKDHKVWFRRGVNSHNPCGSGWIGMVGEMVMINVGLNDQVWGINCEDRAVYFRQG
VTSSELSGKAWKAVSVPRDSDRSHSSASTNSMHSAGCFFGGEVRIQSQGSVLSDLDSDSE
RAPGGGLLSDPEAPAAVAAVDAAAAAAAAAAASGAVATSNADVDIPKPRIPKVTSDSFIS
ELVSDREGQVGRRDGPPSGPSIPEEEGAERDEESKEPPTLVLSASQSVGLQDPQWSNVDL
EEAQTHLAVGPPAEAADTCSLSSVATYHLGLEELYGPDEHPLWAWVSGGGCSVDSHTQLN
WFNSTGMASSAQSMSLSITPAQSAAWRKQIFEQLSERSKREMENFRHYEQAIEQSVWVKK
GAMQWWRDWKPPKWVDVRFALEQFSGVEGNKDGILFIYYTFNEEKKYLHAFVNEVTILVP
VLNDTKHTFAIYTAERTKQRWPIRLAAPTELEMHDWLALLSVSCCDSRGIHGPPSKQAIW
SLTCKGDIFVSEPTPELEASLYPTPCDQMFWRQVGGHLRIIECNSLGVVWGVGYDHTAWV
YTGGYGGGFFQGLASSTDNIYTQTDVKSVYIYENQRWNPVTGYANKGLPTDRYMWSDASG
LHECTKANTKPPSPHWTWVSDWAIDYSVSGGTDREGWQYAADFPASYHGHKTLKDFVRRR
RWARKCKLATTGPWLEVPPIALSDITILPCGAQSTHEQVPLWAISNKGDVLCRLGVTTQT
PAGTSWLHVGTDQPFKSISIGTVHQVWAIARDGSTFYRGSVSAQNPAGDCWYHIPPPAKQ
KLKQVSVGRTSVYTVDENGNLWYRHGVTPSYPQGSTWEHISNNVRKVSLGPLDQVWIIAD
KVQGSHSLSCGTVCRRLGVQPMEPKGQSWDYGIGGGWDHITVRANSTEAPRISMAAAAVA
APPHDGLAQQTPPRSPLPPRSPLPTRSQETEINGDAIGC
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgcctagctccctcctgtgggcggtggacgtttacggtcgcgtatacagcttgtccaca
gcgtgtcagctgtgggaacagtgccgcgatgcgcacctggagttcaagcgcgtgacatcc
gtgcagcagtgctgctggggcatcgcctgcgaccacaacatctacctgaacgtccacgcc
agcgacctgcccatacgctatcaggaggagacctttgagaaccagaggtggaaccctgtg
gacggattctctgatcgcctgttgccaagcgaccgctggcagtggagtgatgtcactggg
ctcgatcaccagccactggagagtttccagctgccttcggaaagctgggaatgggaaggc
gactggtacgcggacgagaacattggaggagaacccacagacaaaacgggttggacatat
gccatagattttccagccacctacaccaaagacaagaagtggaactcctgtgtccgtcgc
cggcgatggattcggtacaggagatacaaagccagggacacctgggccaagattccctcg
gaggagactgggcccttgcccgacccgtttagtgacattagctgcgggggctgggaggtc
agtgaagagcccgccggtcgtctctccctgtgggccgtctctctgcagggcaaggtgtgg
tttcgggacggaatccgccacgacaatccggaaggttccgtgtgggaggaggtgagcatt
ccaggggaggtggtgcagatcagctgtggcccagtggacctggtgtgggccgtgctgtgg
gaggggcagctcctggtcagggagggcatcggccgagactgccccaaagggagctcctgg
gtggtggtggattcgcccagcccagaggtgggagccatccatgtagcagtgggggttaac
gtggtgtgggccatcacaaaggatcacaaagtgtggttcagacggggcgtgaactcccat
aatccgtgtggctcgggctggattggcatggtgggggagatggtgatgattaacgtgggc
ctcaacgaccaggtgtggggcatcaactgtgaggaccgggcggtgtacttccgccagggc
gtgacgagcagtgagctgagcggtaaggcctggaaggcggtgtctgttccccgcgacagt
gaccgctcccactccagcgccagcaccaatagcatgcacagcgctggctgtttctttggg
ggagaggtgcggattcagtcccagggttcggtcctgagtgacctcgactcggactcggag
cgtgccccagggggggggctcctttctgacccagaagcccctgctgctgttgctgctgtt
gatgctgctgctgctgctgctgctgctgctgctgcttctggtgctgttgctaccagcaac
gccgacgtggacatccccaaaccacgcatccccaaagtcaccagcgacagcttcatctcc
gagctggtgtcggaccgcgagggccaggtgggccgacgcgacggccccccctctggcccg
tccatcccagaggaggagggcgcagaaagggacgaggagagcaaggagccccccaccctg
gtgctctccgccagccagtcggtcgggctgcaggacccccagtggagcaacgtggaccta
gaggaggcgcagacgcacctggccgtggggcccccggcggaggcggccgacacctgcagc
ctgtcgtcggtggccacctaccacctgggcctggaggagctgtacgggcccgacgagcac
ccgctctgggcctgggtgagcgggggaggctgctccgtggactcgcacacccagctcaac
tggttcaactccacaggcatggcttcatcggcgcagtccatgtccttgtccatcacccct
gctcagtcagctgcatggcgcaagcagatctttgagcagctcagcgagcggtccaagagg
gagatggagaacttcagacactacgagcaggccatcgaacagtcggtgtgggtgaagaag
ggtgccatgcagtggtggagagactggaagcctcctaagtgggtggacgtgcgcttcgca
ctggagcagttctccggtgtcgagggcaacaaagacggcatccttttcatatactacacc
tttaacgaggagaagaagtatctccatgcgtttgtgaatgaggtgaccatcctggtgccc
gtcttgaatgacaccaagcacacctttgccatctacacggctgagaggaccaagcaaagg
tggcccatccgcctggcagcgccaaccgagctggagatgcatgactggctggctcttctc
agtgtgtcgtgctgcgactcgcgagggatccatggtccaccctccaagcaggccatctgg
tccctgacctgcaagggggacatcttcgtcagtgagcccacgccagagctggaggcatca
ctctatcccacaccctgtgatcagatgttctggcgtcaggtggggggtcacctccgcatc
atcgagtgcaacagcctgggcgtggtctggggtgtcggctacgatcacacagcctgggtc
tacaccggcggctacggaggcggattcttccaggggctcgccagcagcacagataacatc
tatacgcagacggatgtcaagagtgtctacatctacgagaaccagcgatggaacccggtc
accggatacgctaacaagggtctccctactgaccgttacatgtggagtgatgcctcaggc
ctgcacgagtgcaccaaggccaacaccaagcccccctccccacactggacctgggtgagt
gactgggctattgactacagtgtctcaggagggacagacagagagggctggcagtatgct
gcagatttcccagcgtcataccatgggcacaaaaccttgaaggactttgtgcgccggagg
cgctgggccaggaagtgtaaactggctaccacgggcccctggctggaagtcccgcccatc
gccctgagtgacatcaccatcctcccgtgtggcgctcagagcacacatgagcaggtgccc
ctctgggccatcagcaacaagggggacgtcctgtgccgtctgggggtcaccacacagacc
cctgccggaacctcctggctgcacgtcggcacggaccagcccttcaagtccatctccatc
ggcaccgttcaccaggtctgggccatcgcccgtgacggctccaccttctaccgaggctct
gtgtccgctcagaaccccgcaggggactgctggtaccacattcctcccccggccaaacag
aaactcaagcaggtctctgtcggcaggacgtccgtttacaccgttgatgagaacggaaac
ctgtggtacagacacggcgtgacccccagctaccctcagggctccacatgggagcacatc
tccaacaacgtgcgcaaagtctccctggggccactggaccaggtgtggatcatcgcagac
aaagtgcaggggagtcacagcctgagctgtgggacggtgtgccggcggctgggtgtgcag
ccaatggagcccaaaggccagtcgtgggactacggcatcggggggggttgggaccacatc
accgtgagggccaactccacagaggccccccggatcagcatggcggcggcagcggtggcg
gcgccgccacacgacggcctcgcccaacagacacccccgcgcagccccctgcccccgcga
agccccctacccacccgcagccaggagaccgaaatcaacggcgacgccatcggctgctaa
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