KEGG   Clupea harengus (Atlantic herring): 105910230
Entry
105910230         CDS       T09045                                 
Symbol
tsr3
Name
(RefSeq) ribosome biogenesis protein TSR3 homolog isoform X1
  KO
K09140  rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:char03009]
    105910230 (tsr3)
Enzymes [BR:char01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.157  rRNA small subunit aminocarboxypropyltransferase
     105910230 (tsr3)
Ribosome biogenesis [BR:char03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    105910230 (tsr3)
SSDB
Motif
Pfam: Ribo_biogen_C Fer4_RLI
Other DBs
NCBI-GeneID: 105910230
NCBI-ProteinID: XP_012694373
Ensembl: ENSCHAG00000013002
UniProt: A0A6P3WC64
LinkDB
Position
23:complement(11736263..11740739)
AA seq 296 aa
MGKKKAGKSERYVNRGKDTRHKMKGKSLETFTEEMHSALQASEEPAVEGAGVVKLPCPLA
MWDLGHCDPKRCTGRKLVRKGLVRGLRINQRFNGLILSPMGTRYVTPADREIVARSGVAV
IDCSWARLEDTPFNKMIGSHPRLLPYLVAANPVNYGKPCRLSCVEAYAATFCIVGFRDLA
VILLKKFKWGHGFLELNHTLLEGYAASQSEKELLAVEKDYLNSAPQEEELDPFDVDSGRT
CMNLNRPMREDDDENDSDEAKTSEEEKEEEEEREEEVEGSGAMAAEGAEDSDEEAS
NT seq 891 nt   +upstreamnt  +downstreamnt
atgggaaagaagaaagcagggaaaagtgaacggtatgtgaatcgggggaaagatactcga
cacaagatgaagggcaagtcattggagaccttcactgaggagatgcatagcgccttgcaa
gctagtgaggagccagccgtagagggagcaggggtggtgaagctgccatgccccttggca
atgtgggacctgggccactgcgatccaaagcgctgtactggcagaaagctggtacgcaaa
ggcctagtgcgtgggttgcgtattaaccagcgcttcaatggcctaatcctcagccccatg
gggaccagatatgtcacccctgcagaccgggagattgttgctcggagtggcgtagctgtg
atcgactgttcatgggcacggctggaggacacacccttcaacaagatgattggctctcac
ccacgactgttgccttacctagttgcagccaatcccgtcaactatggtaaaccctgccgg
ctgtcctgcgtagaggcttatgctgccactttttgtattgtaggttttcgggacctggca
gtgatacttctcaaaaagtttaaatggggacatggtttcctggaactcaaccataccctg
ctggaaggctatgccgctagccagtcagaaaaggagttgctggctgtggaaaaagactat
ctgaactccgcccctcaggaggaggaactagatccctttgatgtagactcaggcagaacg
tgtatgaatctgaacagacccatgagggaagatgatgatgagaatgacagcgatgaagcc
aagacatctgaagaagaaaaggaagaagaagaagaaagggaagaagaggtagaagggagt
ggagcaatggccgcagagggtgcagaagacagtgatgaagaggcgtcctga

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