Clupea harengus (Atlantic herring): 105910252
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Entry
105910252 CDS
T09045
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105910252 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105910252 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105910252 (mgrn1a)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105910252 (mgrn1a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105910252 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105910252
NCBI-ProteinID:
XP_012694409
Ensembl:
ENSCHAG00000005050
UniProt:
A0A6P3WBM2
LinkDB
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Position
23:complement(11098772..11113293)
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AA seq
562 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGEKFDTPQPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKEDADSPADETGSPRVLYGV
EFSFDADARVAITIYCQAFEEFANGMAIYSPKSPWLASETVHYKRGINQHYSLPSFKIDF
TKWKPEELNFDLDRGVFPMVIQAVVDEGEGRAPDLSGHAHVLLAAFERHVDGSFSVKPLK
QKQIVDRVSYLLQEIYGIENKNKQDKKTPDDENSDNSSECVVCLSDLRDTIILPCRHLCL
CNACADTLRYQANNCPICRLPFRALLQIRAVRKKPAGSVSPVSFSPVLPQSTDHNNEHSQ
SSDNIPPGYEAISLLEALNGISSVPSSISSAPLYGEIQYPGDGGDPLSVSRPQSIGDLTG
DTAMLKSKGSKSPDSSTRSPSSPIQEEEDEERLSEMSDARPHPLLPCSPAPTEVTVTEGS
PEAITPNSDGCSLVHSVSDVLQGCHSERSSLTRTESTPSTELALPGSSDSMESLKSRSTS
SSSQPLLCVPSSLRLEDERLTP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaatactcagtcgtagaattgctggtgttgaagacattgatatccaggctaat
tcggcttatcgatatccaccgaaatcaggcaattacttcaccagccatttctttatggga
ggggagaagtttgatacaccacagccagaaggatacctgtttggtgaaaacatggattta
aatttcctaggcaacagacctgtgcagttcccctacgttaccccagcgccacatgaaccg
gtgaagactctgaggagtttggtgaacatcaggaaagactctctccgactggtcaggtac
aaagaggatgctgatagcccagcagatgagactgggagcccaagagtgctctatggtgtg
gagttcagctttgatgcagatgctcgagttgccatcacaatatactgccaagcctttgag
gagtttgccaatggaatggccatatacagccccaaaagtccctggcttgcatcagaaact
gtccactacaagagagggataaaccagcactactccctgccctccttcaagattgatttc
accaagtggaagccagaggagctgaactttgacctagaccgaggggtctttccgatggtg
atccaggccgtggtggatgaaggggagggcagggctcctgacttatccggacatgcacat
gtgctcctggcagcctttgaaaggcacgtcgacggcagtttctctgtgaaacccctgaaa
cagaagcaaattgtggaccgggtcagctacctgctgcaggagatctatggcattgagaat
aagaacaagcaggacaagaagaccccagatgatgagaacagtgacaacagcagcgagtgt
gtggtgtgcctgtcggacctgcgggacacaatcatcctgccctgccgacacctgtgtctg
tgcaatgcctgcgccgacacgctgcgctaccaggccaataactgccctatctgccgcctg
ccgttcagggctctgctgcagatccgtgcggtgaggaagaagcctgcaggctctgtgtct
ccagtgtccttcagcccagtgctcccgcagagcaccgatcacaacaacgaacactcgcag
agctccgataacatcccgccgggctacgaggccatctccctgctggaggcgctcaacggc
atctcctccgtgccctcctccatctcatcagcccctctgtacggggagatccagtatccc
ggagacggcggcgaccccctgtctgtgagccgaccccagagcatcggcgatttgacggga
gacacggccatgctgaagagcaaaggcagcaagtcacctgacagctccacgcgctcccct
tcctcgcccatccaggaggaggaggacgaggagaggctttcggagatgtcagatgcgcgg
ccccaccctctgctgccctgttctcccgcccccactgaggtcacagttaccgaggggagc
ccagaagcgatcacccctaactcagacggctgttctctggtccactcggtcagtgacgtt
ctgcaggggtgtcacagcgagcgcagtagcctgacccgcactgagagcaccccctccacg
gagcttgccctgcctggctcgtctgactccatggagagcttgaagagccgcagcaccagc
agctccagccagcccctgctctgcgtccccagctccctgcgcctggaggacgaacgcctc
accccctag
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