KEGG   Clupea harengus (Atlantic herring): 105910266
Entry
105910266         CDS       T09045                                 
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    105910266 (jarid2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105910266 (jarid2b)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105910266 (jarid2b)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     105910266 (jarid2b)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2 TfoX_C
Other DBs
NCBI-GeneID: 105910266
NCBI-ProteinID: XP_031441603
Ensembl: ENSCHAG00000017979
UniProt: A0A6P8GSH4
LinkDB
Position
19:complement(25967949..26020716)
AA seq 1266 aa
MADASLPAPIKMADASLPAPSAPITDLSRRKPKTEDFLTFLCLRGYSTSQNEGSPALPSN
MTYFGSSHEGDDLDSDDECEEEELDPCVASVSCQSTPRKGKLPGKLNGHVFNGHGRSQRE
RERESPYYTPAPRSRDRNERAEHRRDAATPQHIGVTARGPTANATTNGHGTHRRDQLRKQ
VSKVNGLTRSAPGGAHMAGAKKAKDFRLPSKTVKYTATVTKGHVTYTKAKRDLVKKTKLN
HSKHSSSSSSSSSSSSLPSSAAALRLHTHNQSPRPASGHQPMPPLSGKAHSSNAKTRKQV
LAANRLLSQPPAGGTAARLNGRLNGQLGAKEERGRGREGLRHSKRRLEAASGGLPLPDRA
SVPSEPAAMTAVATATSSGKAEEPGSLSQSTPADAKKLKLQPSHLETRSRKAVSAVTMPN
GHAAGAATAAPVTPPQVVSPLQAAPPATADPTAPTPAAHPHTQPQRQRPKRASAGKLMLM
RQAQQRAQLASAHNRSSTSAGELRGAEPRMDREKEKEKEREREREREKERERTRAGLAAL
PEAALFRPSAREFQDPLVYLDSVRERAEQSGLCRVVPPPDWRPECKLNDEMRFVTQVQRV
HKLGRRWGPNEQRLACIKTHLRFQGIQMHEPPIIGGCEVDLARFFHLINDMGGMQQVMDL
KKWSRLADLLRIPRSAQDRLAKLQEAYLQYLLSYDSLSPDEHHQLKCQVLAEKELLERRR
GPLEGQVDSAPLSLSQRYEPKNGLLPAGTPRNGFRSRNGTAGGNGVAHKETEASPVKAGR
RRLFAQEKRDAVPDGGVKEEEEEGNRGVLSEQHKCVYKGKSVSLTTFYRIAKNTMNMCFN
KEPSATEVEQEYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNN
SGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKT
KLDKVVHRLLQANGTPGLEMLERNVMISPEMLSREGIRVHRTLQRIGEFVVCFPGTFVSK
VCCGYSVSETVHFATPQWMDLGYETAKDLKCRHIAKPFSMEKLLYQIATAETKRENGLLL
STISALLKDLRNIEMRQRQELHEAGLHSSARYGTLDNNQSPSDGRKKPRKWLALESSERR
CQTCQHLCYLSMVVQENENVVFCLECALAYVENHKSCRGLKMMYRYDEEQINSLVNQVCG
KAVVKSFESCNRPPGSGKTGAKRGPRKRATIEVPLSRLSPSTPSPPSATLLPQGNTHLPK
STALVS
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggccgacgcctccctgcccgcccccatcaagatggccgacgcctccctgcccgccccc
tcggcaccaatcacggacctctcccgccgcaaacccaaaacggaggacttcctcaccttc
ttatgtctgcgaggttactccacgagccaaaatgaaggttcaccagcgttgccaagcaac
atgacatatttcgggagttctcacgagggagacgatcttgacagtgatgacgagtgtgag
gaggaggagcttgacccttgtgtggcatctgtgtcctgccagtcaaccccaaggaagggc
aaactgccaggcaaactgaatgggcatgtgtttaatggccacggtcggagccagcgggag
cgggagcgggagtccccctactacacgcccgcgcctcggtcccgggaccgcaacgagagg
gcggagcacaggagggacgctgccaccccccagcacatcggagtcacagccaggggcccc
accgccaacgccaccaccaacgggcacggcacacaccgcagagaccagctccgcaagcag
gtgtcgaaggtgaatgggctgacccggtccgccccggggggcgcacacatggctggtgcc
aaaaaagcgaaagacttccgcctgccgtccaaaactgtgaagtacacagccaccgtgacc
aagggccacgtcacctacaccaaagccaagcgggacctggtgaagaaaaccaaactgaac
cacagcaaacactcatcttcttcatcatcgtcatcctcttcttcgtccctgccctcgtcc
gctgctgccctccgcctgcacacacacaatcagtccccgcgccccgccagtggacaccag
cccatgccccccctctcaggaaaagcccacagtagcaatgcaaaaacacgcaaacaggtg
ctcgccgccaaccgcctgctctctcagcctccggccggcgggacggctgccaggctcaac
ggccgactcaacggccagctcggtgccaaggaagagagggggcggggacgcgaggggctg
cgtcactccaagaggcgtctggaggcggcatcaggaggtcttcctctgccagaccgtgcc
tctgtcccctcagagccggcggccatgaccgcggtggccacggcgacgtcttcagggaag
gcggaggagcccggcagcctgtcgcagtccacgccagcggacgccaagaagctgaagctg
cagcccagccacctggagacccgcagcaggaaggccgtgtccgccgtaacgatgcccaac
ggccacgctgctggcgccgccacggctgctccggtaacgcccccccaggtggtctcaccc
cttcaggccgcccctcctgccactgcagaccccacggcgcccaccccggccgctcacccc
cacacccaaccccagcgccagcggcccaagcgggcgtcagccggcaagctgatgctcatg
cggcaggcccagcagcgggcacagctggcgtcggcccacaaccgctcctctacctcagcc
ggcgagctgcgtggcgcagagccgcggatggacagagagaaggagaaggagaaggaacga
gagcgagagagggaacgcgagaaagagcgcgagaggactcgcgccgggctggcggctctg
ccggaggccgctctgttccgtccgagcgcgcgggagttccaggacccgctggtgtacttg
gactcggtgcgggagagggcggagcagtccggtctgtgccgcgtggtgcccccgcccgac
tggcggccggagtgcaagctgaacgacgagatgcgcttcgtgacgcaggtgcagcgcgtg
cacaagctgggccggcgctggggcccgaacgagcagaggctggcctgcatcaagacacac
ctcaggtttcagggcatccagatgcacgagccccctatcatagggggctgtgaggtggac
ctggcccgcttcttccatctgatcaatgacatgggtgggatgcagcaggtgatggacctg
aagaagtggagccgcctggccgacctgctgcgcatcccgcgctccgcccaggaccggctg
gccaagctgcaggaggcctacctgcagtacctgctctcctacgactccctcagccccgac
gagcaccaccagctcaagtgccaggtcctcgctgagaaggagctcctggaacgccggcgc
gggcccctggagggccaggtggactcggccccgctctccctctcccagaggtacgagccc
aagaacggcctcctgcccgccggaacgccacgcaacggcttccgcagccgcaacgggacc
gccggcggcaacggcgtggcgcacaaggagacggaggcgtccccagtgaaggcaggacgc
aggaggcttttcgctcaggaaaaaagggatgccgtaccggatggaggagtgaaggaggag
gaggaagaggggaacagaggagttctcagtgaacagcacaagtgtgtgtacaaggggaaa
tcagtatcgttgaccaccttctacagaatagccaagaacaccatgaacatgtgctttaac
aaggagcccagtgctactgaagtggagcaagagtactggcggatagtggagcagagggat
tgccacgtggcagtgcattatgggaaggtggacacaaacacccacggaagcggcttccct
gtgggaaaatcagagccattttcaaagcatggatggaacctcacagttcttcccaataac
tctggctccatcctgcgccacctgggtgctgtaccgggagtgactatcccctggctgaac
attggcatggtcttttctacctcatgctggtcccgagaccaaaaccgccttccatacatt
gattacttacacactggtgctgactgcatttggtattctgttcctgctgaggagaagact
aagcttgataaggtggtgcacagacttctgcaggccaatggtaccccgggcctcgagatg
ctggagaggaacgtcatgatctctccagagatgctgtcgcgtgagggcatccgggtgcac
cgcacgcttcagcgcatcggtgagttcgtggtgtgcttccctggaaccttcgtgtccaag
gtgtgctgtggctacagtgtgtctgagacggtgcacttcgccaccccccagtggatggac
ctgggatacgagaccgctaaggatctgaaatgccggcacatcgccaaacccttctccatg
gagaagctgctctaccagatcgccacagccgaaaccaagcgcgagaatggcttactcctc
agtacaatctccgctcttctcaaagatctcaggaacatagagatgagacagcgtcaggag
ctccacgaggccgggctccactcctccgcccgctacggtacactcgacaacaaccaatca
cccagcgacggacgcaagaagccccgcaagtggctggccctggagtcctccgagagacgc
tgccagacctgccagcacctgtgctacctgtccatggtggtgcaggagaatgagaatgtg
gtcttctgtctggagtgtgctctggcctatgtggagaaccacaagtcatgccgtggcctc
aagatgatgtaccgctatgacgaggagcagattaacagtctggtgaatcaggtgtgtggg
aaggctgtggtcaagagcttcgagagctgcaaccgccccccaggatcaggcaagacaggg
gccaaacggggtcctcggaagcgggccaccattgaggtgcccttgtcccgcctgtccccc
agcaccccctcacctcccagtgccaccctcctgccccagggcaacacacacctccccaaa
agcaccgcgctcgtctcctga

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