KEGG   Clupea harengus (Atlantic herring): 105910303
Entry
105910303         CDS       T09045                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105910303 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105910303 (snupn)
Spliceosome [BR:char03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    105910303 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1
Other DBs
NCBI-GeneID: 105910303
NCBI-ProteinID: XP_031419627
Ensembl: ENSCHAG00000022865
UniProt: A0A6P8F905
LinkDB
Position
3:complement(145337..161878)
AA seq 370 aa
MDDLTKALSGSFSVSQDFNCVSAPHPRLAQYKSKYSALEQGERRRRFLELQKTKRLNYVN
HARRLADGDWTGADSDDEETAETAEKAQESQQDAEEEEDMEVQRKLPKHYANQLMLSEWL
VEVPAEMASDWLLVPCPVGKRSLVIASKGSTAAYTKSGYCVNRFASVLPGGNRQNSATGK
DYTILDCIFSEVDRTFYILDVMCWRGHPLYDCSTEFRFFWLQSKMEEEGGLVEMTKRNAF
RFVSLQSTVCTKESIREALVKEYTFNVDGFLFYHKESHYTPGSTPLVGWLRPYMIGDIIN
MEVPECALTCKPEYAQDQLEQILKHKRTTNSDVRPAEQNGRYELEHLSTPDAKKDKQHSL
QKQREAHMEI
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggacgacttgaccaaagccctctctggcagcttttctgtgtcccaagacttcaactgt
gtgtcggctccccacccacggctggcccaatacaagagcaaatacagcgccctggagcag
ggggaacggcggcggagattcttggaacttcagaaaacgaagaggctgaactacgtcaac
catgcccgccgtttggcagacggggactggaccggagccgacagtgacgatgaggagacg
gcggagacggcagagaaagcccaagagtcccagcaggatgcagaagaagaggaggacatg
gaggtccagcggaagttgccaaagcattatgctaaccagctgatgttatcggagtggtta
gtagaagtgcctgcagaaatggcctcggactggctgttggtgccctgtccagtaggaaag
cgatctcttgtcattgcctccaagggatcgacagctgcgtacactaagagtggctactgt
gtcaaccgcttcgcctctgtactcccaggaggaaacaggcagaactcggctacaggaaaa
gattataccatccttgactgcattttcagtgaagttgataggaccttctacattcttgat
gtcatgtgctggaggggtcaccccttgtatgactgttccacagaattccggtttttctgg
cttcagtcaaagatggaggaagaaggtggcctggtggaaatgaccaagcgtaatgctttt
cggtttgtgagccttcagagcactgtgtgcacaaaggaatccatccgggaggcacttgtc
aaggagtacaccttcaatgtcgacggcttcctcttctaccacaaggaaagccactatact
cccggcagcacccctctagtgggttggctgcgcccctacatgatcggagacatcattaat
atggaggtgccggagtgtgcgctgacgtgtaagccagagtacgctcaggaccagctggag
cagatcctcaagcacaagagaacaaccaacagcgacgtgcgtccggccgagcagaacggc
aggtacgagctagaacatctctccacgcctgatgcaaaaaaagataaacaacactccctg
caaaaacagagagaagcacacatggaaatctga

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