Clupea harengus (Atlantic herring): 105910303
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Entry
105910303 CDS
T09045
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105910303 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105910303 (snupn)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
105910303 (snupn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
Motif
Other DBs
NCBI-GeneID:
105910303
NCBI-ProteinID:
XP_031419627
Ensembl:
ENSCHAG00000022865
UniProt:
A0A6P8F905
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Position
3:complement(145337..161878)
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AA seq
370 aa
AA seq
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MDDLTKALSGSFSVSQDFNCVSAPHPRLAQYKSKYSALEQGERRRRFLELQKTKRLNYVN
HARRLADGDWTGADSDDEETAETAEKAQESQQDAEEEEDMEVQRKLPKHYANQLMLSEWL
VEVPAEMASDWLLVPCPVGKRSLVIASKGSTAAYTKSGYCVNRFASVLPGGNRQNSATGK
DYTILDCIFSEVDRTFYILDVMCWRGHPLYDCSTEFRFFWLQSKMEEEGGLVEMTKRNAF
RFVSLQSTVCTKESIREALVKEYTFNVDGFLFYHKESHYTPGSTPLVGWLRPYMIGDIIN
MEVPECALTCKPEYAQDQLEQILKHKRTTNSDVRPAEQNGRYELEHLSTPDAKKDKQHSL
QKQREAHMEI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgaccaaagccctctctggcagcttttctgtgtcccaagacttcaactgt
gtgtcggctccccacccacggctggcccaatacaagagcaaatacagcgccctggagcag
ggggaacggcggcggagattcttggaacttcagaaaacgaagaggctgaactacgtcaac
catgcccgccgtttggcagacggggactggaccggagccgacagtgacgatgaggagacg
gcggagacggcagagaaagcccaagagtcccagcaggatgcagaagaagaggaggacatg
gaggtccagcggaagttgccaaagcattatgctaaccagctgatgttatcggagtggtta
gtagaagtgcctgcagaaatggcctcggactggctgttggtgccctgtccagtaggaaag
cgatctcttgtcattgcctccaagggatcgacagctgcgtacactaagagtggctactgt
gtcaaccgcttcgcctctgtactcccaggaggaaacaggcagaactcggctacaggaaaa
gattataccatccttgactgcattttcagtgaagttgataggaccttctacattcttgat
gtcatgtgctggaggggtcaccccttgtatgactgttccacagaattccggtttttctgg
cttcagtcaaagatggaggaagaaggtggcctggtggaaatgaccaagcgtaatgctttt
cggtttgtgagccttcagagcactgtgtgcacaaaggaatccatccgggaggcacttgtc
aaggagtacaccttcaatgtcgacggcttcctcttctaccacaaggaaagccactatact
cccggcagcacccctctagtgggttggctgcgcccctacatgatcggagacatcattaat
atggaggtgccggagtgtgcgctgacgtgtaagccagagtacgctcaggaccagctggag
cagatcctcaagcacaagagaacaaccaacagcgacgtgcgtccggccgagcagaacggc
aggtacgagctagaacatctctccacgcctgatgcaaaaaaagataaacaacactccctg
caaaaacagagagaagcacacatggaaatctga
DBGET
integrated database retrieval system