Clupea harengus (Atlantic herring): 105910367
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Entry
105910367 CDS
T09045
Symbol
pax6a
Name
(RefSeq) paired box protein Pax-6 isoform X6
KO
K08031
paired box protein 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105910367 (pax6a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105910367 (pax6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
105910367
NCBI-ProteinID:
XP_012694531
Ensembl:
ENSCHAG00000026679
UniProt:
A0A6P3WBN1
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Position
3:30024099..30041248
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AA seq
433 aa
AA seq
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MMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVLDNEN
VSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLL
SEGTCTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTS
VPGQPNQDGCQQSDGGGENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEK
EFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNSSSHIPI
SSSFNTSVYQPIPQPTTPVSFTSGSMLGRPDTALTNTYSALPPMPSFTMGNSMPMQAPVP
SQTSSYSCMLPTSPSVNGRSYETYTPPHMQAHMNSQSMGPSGGSTGLISPGVSVPVQVPG
SEADMSQYWPRLQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaacagtcacagcggagtgaaccagcttggcggggtcttcgttaacggcaga
ccgctacccgactccaccagacagaagatagtggagctcgcccacagcggtgcacgaccg
tgtgacatatccaggattttgcagacccatgctgatgcaaaagtgctggacaatgaaaac
gtgtcgaacgggtgtgtgagtaaaatcctgggcagatactatgaaacaggctccatcaga
cctagagcaatcggtggaagtaaaccaagagtagcaactcccgaggtggtcggcaaaatt
gcccagtataagagggagtgcccatctatcttcgcctgggaaatccgagacagactgcta
tcagagggcacctgtacgaacgataatataccaagtgtgtcatcgataaacagagtactg
cgcaacctggctagcgaaaagcaacagatgggcgcagatggcatgtatgagaagctgaga
atgctgaacggtcagacggggacatgggggacccgaccgggctggtaccccggaacctcc
gtgccaggacagcccaatcaagatgggtgccagcagtcagatgggggaggggagaacaca
aactcgataagttcaaacggggaggactccgaagagacacaaatgaggcttcagctcaaa
cgaaaattgcaacggaatcgcacatcatttacgcaggagcagatcgaagcactcgagaaa
gagttcgaacgaacacattaccccgacgtgtttgccagggaacggctcgcagccaaaatc
gacctccctgaagccagaatacaggtgtggttctcaaacagaagagcgaagtggcgacgc
gaagaaaagctccgtaaccagagacggcaagccagcaactcctccagccacataccaatc
agtagcagcttcaataccagcgtctaccagcccataccacaacctacgacgccagtatcc
ttcacatcagggtccatgttggggagaccagacacagctctcacaaacacatacagtgcc
ctgcccccaatgccaagcttcacaatgggcaacagcatgcctatgcaagctcctgtgccc
agccagacctcgtcctactcttgcatgttacccaccagtccgtcagtaaatggccgaagc
tacgagacgtacaccccccctcatatgcaggcacatatgaacagccaatcaatgggccca
tcaggcggctcaacaggtctcatctctcctggagtatcagtcccagtccaagtgccaggc
agcgaagcggacatgtctcagtactggcccagactacaataa
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