Clupea harengus (Atlantic herring): 105910425
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Entry
105910425 CDS
T09045
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105910425 (ppfibp2b)
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105910425 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
LRRFIP
Filament
XLF_CC
AAA_13
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
105910425
NCBI-ProteinID:
XP_031421176
Ensembl:
ENSCHAG00000026362
UniProt:
A0A6P8FBI1
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Position
3:complement(29624771..29675651)
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AA seq
1048 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAVAELTNGLYDLGSPVSSAPLQVLQLAEDLRLALEL
QACDGERETLRSQLPCATAHLLIDWLQKGSINLQSPPNNESCQDRLERLEGDKQSLVLQV
SVLTDQVEAQGEKIRDLESSLDEHHHKLISTEEMLQQELLSRTSLETQKLDLMDEVSYLK
LKMVGMEEEPQSPANSDDRQHKAESVVNLISELQEQMCKFQEEISTRIQEKRALEGQAQE
ALSQSPNTGLGGPDAEDDCCCRGDPTGHSAALMQELRLLKYKVDELEGEKSQYERKLKAT
KTEIAELKRILASKDSEIECLQSQLRSRGALSNDFTEREEVCRKKLKDKYHELQHLKMGM
DSLLAANDEKDRHIEELTALLGRYHKMKDVMALSQVTNEKLLCGSSEEELSGSLKMRGLT
HKAHSDIMRSEMSSRGPSPLLVSPLCLQKDMDSSCRSFQLAMESTITPSSISYHNGQWQV
DRVQPRLLSTSLEELQSQSVHKHVLGQPVEPVLQNHHVDSNKYRTLPGKLPRLQQNGERE
KYSPPRQLSPADSEDSQFNLNRCRSASAPALGSRGRLDLFGAGRTERADESTLSDLSPLS
SGRDSGQQSPVSPEHRKTQRGIKKLWGKIRRSQSGSLPAGESESGEFRRGGMRATAGPRL
ATTGLAARDMNMPFSKWSPEQVCSWLEDFGLGQYSSQTRQSISSGQTLLSASTQDIEKET
GIKHPLHRKKLQLALRTFSNKHTEKSAELDHIWVTRWLDDIGLPQYKDQFNDARVDGQML
QYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNKFNPNCLKRRPGDEHNVTPSEVVQWSNH
RVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFNSETLAMLLNIPPQKTLLRRHLATNF
GSLVGGQAQQEKREFMESPNYTPLTTTAKVRPRKLPFSNFSQLRRKKADETTDYICPLEA
AQTQALVNGAHRPYSGFRGLSPILDRDPERVQALATRGSILQIEALSEGINNLTDSQERS
GAGGGSPAVSTRGRFILVSYTPVHILQP
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgatgcaagccacatgctggaggctgcgctggagcagatggatgacattatc
gcaggctctaaggctgttgcggagctgactaacggcctgtatgacctgggctctccagtc
agctcggcgcccctgcaggtgctgcagctggccgaggacctgaggctggccctggagctg
caggcctgtgacggggagagggagacgctccgctcgcagctgccctgtgccaccgctcac
ctcctcatcgactggctgcaaaagggctcaattaacctccagtcaccacccaacaatgag
agctgtcaggatcggctggaacgcttagagggtgataaacagtctttggttcttcaggtg
agtgtactgacagaccaggtggaggctcagggggagaagatacgggacttggagagctca
cttgatgagcaccaccacaagctcatctcgactgaggaaatgctacagcaggagttgctg
agccggacttctttggagacgcagaaactggatctgatggatgaggtttcctatctgaaa
ctgaagatggtgggcatggaggaggagccgcagagcccggccaacagcgacgacaggcag
cacaaagctgagtctgtagtcaatctgattagcgagctacaggagcagatgtgtaagttt
caggaggagatcagtactcgcatccaggagaagcgggctctggagggccaggcccaagag
gccctcagccagagccccaacacaggcctgggtggccctgatgccgaggacgactgttgc
tgtagaggagaccccacaggccacagcgctgccttaatgcaggagctgcgtctgctgaaa
tataaggtggacgagctggagggggagaagagccagtatgagaggaagctgaaggccaca
aagacggagattgcagagctgaagcggatcctagcctccaaggactctgagatcgagtgc
ctgcagagccagctgaggtcccgcggagcgctgagcaacgacttcactgagagagaggaa
gtgtgcaggaaaaagctaaaagacaaatatcatgagctccaacacctgaaaatgggaatg
gattccttgttagctgccaacgatgagaaggaccgccacattgaggagctcactgctctc
ttgggccggtaccacaagatgaaggatgtgatggctctctctcaagtgaccaatgagaag
ctcctgtgtgggagcagcgaggaggagctgagtgggagtctgaagatgagaggcctgacg
cacaaagctcactcggacatcatgagatcggagatgtcctccagaggcccctcccccctg
ctggtctctcccctgtgcctccagaaggacatggactccagctgccgcagcttccagcta
gctatggagtccacaataacccctagcagcattagctaccacaatggacagtggcaagta
gatcgggtacaaccacggctcctgtccaccagtctggaggagctgcagagccaatctgta
cacaagcatgttttgggtcagccagtagagcctgttctgcagaaccatcatgtagacagt
aataaatacaggaccctgccaggcaagctgccccgcctgcaacagaatggggagagagag
aagtactccccaccacggcagctgtccccagccgacagcgaggacagccagttcaacctc
aaccgctgccgaagtgccagcgctccagctttaggctcaaggggaagacttgatcttttc
ggagccggaaggacagagagggcggatgaatcgacgctgtctgacctctctcctctgtcg
tctggaagggactcaggccagcagtcgcctgtctctccggagcacaggaaaacgcagagg
ggcatcaagaagctgtgggggaagatccgcaggtctcagtcgggaagcctgcccgccggc
gagtcggagtcgggcgagttccggagaggaggcatgagagccacggctggacctcgactg
gccaccacaggactcgcggcacgtgacatgaacatgcccttttccaagtggagcccggag
caggtgtgcagttggctggaggactttggcctgggacagtacagcagccagactagacag
tctatcagcagcgggcagaccctcctgtctgccagcacacaggacatcgagaaggagaca
gggattaagcatccactgcacaggaagaagctccagttggccctgcgcaccttcagcaac
aagcacacggagaagtctgctgagctggatcacatctgggtcacgcgttggctggatgat
attggattacctcagtacaaagaccagttcaatgacgcaagggtagacggccaaatgctg
caatatttgacagtgaatgatctgctgttcctgaaggtgaccagtcaactccatcacctc
agcatcaagtgtgccatccatgtgcttcacgtcaacaagttcaaccccaactgcctgaag
cgcaggcctggagatgagcataacgtaacgccctctgaagtggtgcagtggtccaaccac
cgtgtaatggagtggctccgctcagtggacctggctgagtacgcgcccaacctgaggggc
agtggagtccatggaggcctcataatcctggagccgcgcttcaactctgagacattagcc
atgctcctcaacatcccgccacagaagacgctgttgcgtcggcacctggccaccaacttc
ggctccctggtgggggggcaggcccagcaggagaagagggagttcatggagtcgcccaac
tacacccccctcaccaccaccgccaaagtccggccaaggaagctgcccttttccaacttc
agtcagctgaggaggaagaaggcggacgagaccacggactacatctgccccctggaggcg
gcacagacccaggccctggttaacggggcccaccggccctacagcggcttcaggggcctc
agccccatactcgacagggaccccgagagggtgcaggcgctggccacccggggaagcatt
ttgcagatagaagctctgtcagagggaataaacaacctgacagattctcaggagcggagt
ggggctggtggaggttcccctgcagtcagcacccggggcagatttatactggtgagttat
acacctgtgcacatccttcagccatag
DBGET
integrated database retrieval system
