Clupea harengus (Atlantic herring): 105910456
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Entry
105910456 CDS
T09045
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105910456 (prdm4)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105910456 (prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
SET
zf-met
zf-C2HE
Mu-like_Com
FAM176
Pox_Ag35
Paf1
Motif
Other DBs
NCBI-GeneID:
105910456
NCBI-ProteinID:
XP_042566022
Ensembl:
ENSCHAG00000000433
UniProt:
A0A8M1KQ61
LinkDB
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Position
16:27406057..27418912
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AA seq
801 aa
AA seq
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MNEMNLSPVGMDQLSVPAVSASHLGLPVSPTHGSITSAGLSVPIPSLPPSLGALPSALSL
MLPMAPLAERGGVMCGALGPLPDRNYPLPPPPYPHLESSYFRHILPGILSYLADRPPPQY
IHPSSLNLDGPLSVSSGAATSGLDPYGGLVGGHHEGALDGGLAGMEQSRVSSPGEGMGGG
ELAGMEGGRGVDAAGVGVLPLQASGLELPSVVLEPEHMGGGRAGGLGEGLHPSGGLGPGA
GGVLPPGVVRVVLTGSMPPPTGHTGVCVGLEQGASEALGPESGLVLVNNTLQLDDSTSNK
ENMATAFNIWCTLCDRSYPSDCPEHGPVTFIQDTPIQTRARLSLPRPLCLRVSVADEPIG
VCARETIPARTCFGPVVGQHCSSVGLAAWTDKDTPQIWKMFHNNLQEFCLVTTDENECNW
MMFVRKARTTEEQNLVAYLDNRKLYFCVSREILPEQELLFYYSKDYCRQIGVPLVPEGQV
CHCGKECSSFSDLKAHLESHAPSHSPSHASQEHHGHQSGGKLTGSGSSGSASSSPWPCHA
NGGGAGGGGVSVGVSGGRARKFKCSMCSRAFSTSTKLNTHFMGHVGMKPHKCEYCSKAFS
DPSNLRMHLKIHTGQKNFRCSLCEKSFTQKAHVASHMVIHTGARNLKCDHCDRLFMRKQD
LKQHLLTHTQDSQIRCPKCDKRFLKSNHLKKHLNSHDGRRDYICEKCSKAFLTKYHLTRH
LKICKGPPQTSRGRPQNHRGTRGGAEEEEEEDDEEEEEEEEEEEEREDESAAVGPEDIAG
SQDCGLEEGGYPSNTAPSPDP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatgaacctgagcccagtgggaatggaccagctgagtgtgcctgccgtgagc
gcgagccacctcgggctccccgtctcccccacgcacggctccatcacgtcagcaggcctg
tcggtgcccatccccagcctgcccccctctctgggcgccctgccctcggcgctgtccctc
atgttgcccatggcgccgctggcggagcgggggggtgtgatgtgcggcgccctgggcccg
ctgcccgacaggaactaccccctgcccccgcccccctacccccacctggagagcagctac
ttcaggcacatcctgccaggtatcctgtcctacctggctgaccgcccgcccccccagtac
atccaccccagcagcctgaacctggacggccccctgtcagtgtccagcggtgccgccacc
tccgggctggacccctacggcgggctggtgggggggcatcacgagggggcgctggatggg
ggtctggcgggcatggagcagtcccgcgtgagcagtcctggggagggcatggggggggga
gagctggcgggcatggaggggggccggggggtggacgcggcgggggtgggggtgctgccc
ctgcaggcgtcagggctggagctcccctccgtggtcctggagccggagcacatggggggg
gggcgtgcgggggggttgggggaagggctgcacccctctggggggttgggtccgggggcg
gggggcgtgctgcccccgggggtggtcagggtggtgctcaccgggtccatgccccccccc
acggggcacacaggtgtgtgtgtcgggctggagcagggggcctccgaggcgctgggaccc
gagagcggcctcgtgctcgtcaacaacactctgcagctggacgactccacctccaacaag
gagaacatggccaccgcattcaacatctggtgtactctgtgtgaccgctcctacccttca
gactgtcctgagcacggccccgtcacattcatccaggacacgcccatccagaccagggcc
cgcctctctctgccccgccccctttgtctgcgcgtgtcggtggctgatgagccaatcggt
gtgtgtgctcgagagactatcccagccaggacgtgttttgggccggtggtgggacagcac
tgcagcagtgtggggctggcggcctggacagacaaagacacgccccagatctggaagatg
ttccacaacaaccttcaggagttctgcctcgtcaccaccgatgagaatgagtgcaactgg
atgatgttcgtccgtaaggccagaaccactgaggaacagaacctggtggcgtacctcgac
aacaggaagttgtatttctgcgtttccagagaaatccttcccgaacaggagctgctcttc
tactacagtaaagactactgcaggcagataggtgttcctctggtacctgagggtcaggtg
tgccactgtgggaaagaatgctcctccttctccgatctcaaggcccacttggaaagccac
gcccctagccactcccccagccacgcctcccaggaacaccacggccaccaatcggggggc
aaactgactggctctgggtcttccggctccgcctcctcctccccctggccgtgtcacgct
aacgggggcggcgccgggggcgggggcgtgtccgtgggcgtgtctggggggcgggccagg
aagtttaagtgcagcatgtgttcgcgtgccttcagcacgtccaccaaactcaacacacac
ttcatgggccacgtggggatgaagccacacaagtgtgaatactgcagcaaggccttcagc
gaccccagcaacctgcggatgcacctcaagatacacacaggccagaagaacttccgctgc
agtttgtgtgagaagtcttttacccagaaggcccacgtggcgtctcacatggtcatacac
accggcgcgcgcaacctgaagtgtgaccactgcgacaggctcttcatgcgcaaacaagac
ctcaaacagcacctcctcacacacacacaagacagtcagatccgctgccccaagtgtgac
aagcgcttcctgaagagcaaccacctaaagaagcacctgaactcgcacgacggtcgccgc
gactacatctgtgagaagtgcagcaaggccttcctcaccaagtaccacctgaccaggcac
ctcaagatctgcaaggggcccccccagacgagtcggggcaggccacagaatcaccggggg
acacgggggggagcggaggaggaggaggaggaggacgatgaggaggaagaagaggaggag
gaggaggaggaggagagggaagatgaaagcgcagcagtgggacctgaggacatagctggc
tcacaggactgtggactggaggagggggggtacccctcgaacacagccccctcacccgac
ccctga
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