Clupea harengus (Atlantic herring): 105910486
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Entry
105910486 CDS
T09045
Symbol
erc1b
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105910486 (erc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105910486 (erc1b)
Membrane trafficking [BR:
char04131
]
Exocytosis
Others
Others
105910486 (erc1b)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105910486 (erc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
PKcGMP_CC
CCDC18_1st
DUF5798
ENOX1
Motif
Other DBs
NCBI-GeneID:
105910486
NCBI-ProteinID:
XP_031438371
Ensembl:
ENSCHAG00000025791
UniProt:
A0A6P8GLA7
LinkDB
All DBs
Position
16
Genome browser
AA seq
1031 aa
AA seq
DB search
MYGSARSVGKPEGNHSGGSGGQSPGRSPRLPRSPRLGHRRTSSSGGGNGMGGGGKTLSME
NIQSLNAAYATSSPLYLSDTHTHPDPVSASSSAQSSLTLGGRSGGVSVGVGGRAGGGYGG
GRSAGMGSSPNIASDAIAFGDHHVPAASSMASSSSSTVPHSLRQARDNTILELQAQLKEV
LRENELLRGEAAAKESKLSSSMNSIKTFWSPELKKERALRKDEMAKITVWKEQYRVMQDE
AQHFQMTIQALQDELRIQRDLNQLFQQDGGGVSSGGGGLLSFRPGSGEVEPTEENFLRLH
AEHERQAKELFLLRKTVEEMEMRIETQKQTLGARDHSIKKLLEMLQSKAPGAMTTEEDHE
RTRRLADAQMHAHHLESLLQQRDKEIVTLREELQRRYEGTPESAKTKALQTVIEMKDSKI
SSLERGLRDMEEEIQMLKSNGALSTEERQEEVKQMEVYRSHSKFMKNKIDQVKQDLSRKD
TEMLGLQTKLETMNNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRVRLEEKEAMLT
KKTKQMQDVSEEKGTLGGEIYDLKDMLDVKERKVNVLQKKIENLQEQLHDKEKQLSSLKE
RVKSLQTDTSNTDTALTTLEEALAEKERIIERLKEQRDRDEREKMEELDNNKKELKDLKE
KITFLQGDLSDRETCLLDLKEHASSLASSGLKKDSKLKTLEIALEQKREECIKMDNQLKR
QSEVMQSRSSDLAQSAALEAQSNPELTERIATLEQDVTRHREDAGKAQSEVDRLLEILRE
MENEKNDKDKKISELERQMKDQSKKVANLKHKEQVEKSRTASLLEEARKREDNITENTQQ
AKDTLQQKDERIEELEEALRESVQITAEREMVLAQEESARTHAEKQMDDLLCAMEKVKQE
LESMRMKLASTQQSLTDKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLEL
SSSKKKKTQDEVAMLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKASSHSDPTNHKPS
PDQDDEEGIWA
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcagtgcccgctccgtgggcaaaccggaggggaaccatagcggtggcagcggt
gggcagagtcccggccgatccccccgtctgccacgctccccccgcctgggccaccgccgc
accagcagctccggggggggcaacggcatgggcggggggggcaagaccctgtccatggag
aacatccagtccctgaacgccgcctacgccacctccagccccctgtacctgagcgacaca
cacacacaccccgaccccgtgtccgcctcctcctccgcccagagcagcctgacgctgggg
ggccgctccggaggggtgtccgtgggggtgggggggcgcgctgggggagggtacgggggt
ggccgcagcgcgggcatgggcagcagcccaaacatcgccagcgacgccatcgccttcggc
gaccaccacgtgcccgccgcctccagcatggcatcgtcgtcctcctccaccgtgccccac
tcgctgcgccaggcgcgcgacaacaccatcctggagctccaggcgcagctgaaggaggtg
ctgcgggagaacgagctgctgcgcggggaggcggcggccaaggagagcaagctcagctcc
tccatgaactccatcaagaccttctggagccccgagctgaagaaggagcgcgcgctgcgc
aaggacgagatggccaagatcaccgtctggaaggagcagtaccgcgtcatgcaggacgag
gcccagcatttccagatgacgatccaggcgcttcaggacgagctgcggatccagcgcgac
ctcaaccagctgttccagcaggacggggggggcgtgtcgtccggggggggcggcctgctc
agcttccgcccggggtcgggggaggtggagccgacggaggagaacttcctgcgcctccac
gccgagcacgagcgccaggccaaggagctcttcctcctgaggaagacggtggaggagatg
gagatgcgcatcgagacgcagaagcagacgctcggcgcccgcgaccacagcatcaagaag
ctgctggagatgctgcagagcaaggcgcccggcgccatgacgaccgaggaggaccacgag
cgcacgcgccgcctcgccgacgcacagatgcacgcgcaccacctggagagtctgttacag
cagagggacaaggagatcgtcacactcagagaggagctgcagagacgctacgagggaacg
cctgaatcggccaagaccaaagccctgcagactgtcattgagatgaaggactctaagatc
tcttctctggagcgtggtcttcgtgacatggaggaggagatccagatgttgaagtccaac
ggcgctctgagcacggaggagcggcaggaggaggtcaagcagatggaggtctaccgcagc
cactccaagttcatgaagaacaagattgaccaggtgaagcaggacctctccaggaaggac
acggagatgctgggccttcagacgaagctggagacgatgaacaatcagttctccgacagc
aagcagcacatcgaggtgctcaaggaatccctcaccgccaaggagcagagggctgccatc
ctgcagacagaggtggacgccctgcgggtgcgtctggaggagaaggaggcgatgctgacg
aagaagacgaagcagatgcaggacgtgtcggaggagaagggcaccctggggggcgagatc
tacgacctcaaggacatgctcgacgtcaaggagcgcaaggtcaacgtcctgcagaagaag
attgagaacctgcaggagcagctgcatgataaggagaagcagctaagcagtctgaaggag
cgggtgaagtctctgcagacggacacctccaacacagacaccgccctcaccaccctggaa
gaggctctcgctgagaaggagcggatcattgagcgtctgaaggagcagagggacagggac
gagcgggagaagatggaggaactggacaacaacaagaaggagctgaaggacctgaaggag
aagatcacattcttacagggagacctgtctgaccgcgagacgtgtctgctggacctgaag
gaacacgcctcctcgctggcctcctccggcctgaagaaagactccaagctcaagaccctg
gagatcgccctggagcagaagagggaggagtgcatcaagatggacaaccagctcaagagg
cagtctgaggtcatgcaaagccgctcctctgatcttgcccagtcggcggcgctggaggcc
cagtccaaccccgagctgacggagcgcatcgccacgctggagcaggacgtcacgcggcac
agagaggatgctgggaaggctcagagcgaggtggaccgcctgctggagatcctgagggag
atggagaacgagaagaacgacaaggacaagaagatcagcgagctggagaggcagatgaag
gaccagagtaagaaggtggccaacctgaagcacaaggagcaggtggagaagagccggacc
gccagtcttctggaggaagcgcgcaagagggaggacaacatcacagagaacacacagcag
gccaaggataccttgcaacagaaggacgagcggatcgaggagcttgaggaggcgctgaga
gagagcgtccagatcacggccgagagagagatggtgctcgctcaggaggagtctgctcgc
acacacgcagagaagcagatggacgacctgctgtgtgcgatggagaaggtcaagcaggag
ctggagtcgatgaggatgaagctggcgtccacccagcagtctctgacggacaaggaggca
cacctgaccacgctccgcgccgagaggaggaaacatctggaggaggtgctcgagatgaaa
caggaggcgctgctggctgccatcagtgagaaggacgccaacatcgccctgctggagctg
tcctcctccaagaagaagaagacgcaggacgaggtcgccatgctgaagagggagaaggac
cggctcgtccagcagctcaaacaacagactcagaaccggatgaagctgatggctgacaac
tacgaagacgatcacctaaaggcctcttcacactcagacccgaccaatcacaagccctct
ccagaccaggacgatgaggagggcatttgggcgtag
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integrated database retrieval system
