Clupea harengus (Atlantic herring): 105910507
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Entry
105910507 CDS
T09045
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105910507 (arid5b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
ARID
105910507 (arid5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
105910507
NCBI-ProteinID:
XP_012694686
Ensembl:
ENSCHAG00000002589
UniProt:
A0A6P3WBZ3
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All DBs
Position
23:complement(15370797..15464117)
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AA seq
1271 aa
AA seq
DB search
MEPNSLMWVGSPCGLHGPYIFYKAFRFHLEGKPRILSLGDFFFVRCKPGDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPLGRTVSHGEDEVIAVSEKVIVRLEDLVKWTVWDSSCW
RKGLKAVPLKPTVLRELGKNGQREALHRYRESTLNSGLNFKDVLKEKAELGEDGEDRRAL
VLSYPQYCRYRSVIARLRERPNSLLTDQIVLALGGIASLTNNTQILYCRDTFEHPTLVEN
ESVCDEFAPNLKGRPRKKKLSISQRRDSQGQSTAAKEPGGSESKTPAKVKAETKAVTASN
KPKNSSSSSSSNGGNCKKSTSAEEKLKAGAGDEGSEADEEQAFLVSLYKYMKERKTPIER
IPYLGFKQINLWTMFQAAQKLGGYEVITARRQWKNVYDELGGNPGSTSAATCTRRHYERL
ILPYERYTKGEEDRPLPPVKPRRHEGNGQESSPAVSRTKATAGGTKRSKEEQSSRLKPDK
EASAIKDSECPEDQKKEELEEHDDDEDDDEDDDDEKEQTKPEVQGEPESRSTKEEDEEDE
EEVVEVKPEVKEEPDSVCSLERTAPPRSALWDGGRPISPAGDLAVATPQADMNVMRFKDD
EVFAVAAPAKSVHYTVTNPWQSGVGEFAVPPLLSKMGIPEPAGTKENQCHVGMVLPTLQQ
RPSLQPLLAPEIPTERAELPSREEASFSYSPLLYPKANPGIMSPLAKKKLLSQVSGTALS
NNYSFGPPPPLIPNKASGLGAEGAEEALSAPGSLASSGSEGGFISRPSVIQHAQSFRPHG
CVEELRPPNKEALQRDGSGVSLSEPYSTHHHPHPHPHPHLHPHPHAHPHPHPHAHPHPQP
QHGPTVEPYLLRAESHGGMEKPPDTPRPGHAPSFLGDFYSSPHLHNLYRQAEHHLGKEHL
SKYLHREAFPRDCESTPGFPSGQHQPPPDSIGLVYGVCLTQKDKLPSGGERTTEDQPTDL
SLPKCSPPKPPPSSPSLCSLSHPPIIPPQDLKLTNTSLPYQTASGQGSSLDYHPRACRVP
PMTISAPKNPTEPLPHHQPLPRGLDKASHNGRPEEPNVGFKVEELARPILGTKSCPQNVG
AARPLKRPLGELESGLPEKKVRAVTPMHCSMPREVPCKQRTPSPAAEPVKPATPTPPHAT
LINGYAPESHKYPLHTPHIFHGLYPGAFVSQMQDMCDGMGGPVPAGYSHQLQYLKNQAVL
SPLVPPFAIHSFMMQRQLLAQAAASPAHLYQHPMGASYGDLLHHGLYPMSALNHQPAFSP
PQLQHPSTKLS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcatgtgggtaggctcaccttgtggtttgcacggaccttacatt
ttctacaaggcatttcgatttcaccttgaaggcaaaccaagaatattatccctcggcgac
tttttcttcgtaagatgtaagccaggggatccgatttgcatagcggagctccagttgtta
tgggaagaaaggacaagcaagcaacttttatccagctccaaactttattttctcccagaa
gatactcccttgggaaggactgtcagtcatggagaggacgaggtgatcgccgtgtcagag
aaggtaatcgtgcggctcgaagacctggtgaaatggacggtgtgggactcctcgtgctgg
aggaagggcctgaaggccgtgcctctgaagcccaccgtgctgagggagctgggcaagaac
ggccagcgggaggccctccaccgctaccgcgagtccacgctcaacagcggcctcaacttc
aaagacgtgctcaaggagaaggccgagctaggtgaggacggcgaggacagacgggccctg
gtcctgagctacccacagtactgccggtaccggtccgtcatcgcccggctgcgtgagcgg
cccaactccctgctgacggaccagatagtgctggcactgggcgggatcgcctcgctcacc
aacaacacccagatcctctactgcagggacaccttcgagcaccccacgctcgtggagaac
gagagcgtctgcgacgaattcgctcccaatctgaagggccggccccggaagaagaagctg
tccatctcccagcggcgggactctcagggccagagcacagcagccaaggagcccggcggc
tccgagagcaagacccctgccaaggtaaaggcagaaacaaaggctgtgacggcatccaac
aagcccaagaacagcagcagcagcagcagcagcaatggcggcaactgcaagaagtccaca
tcagcggaggagaagctgaaggctggcgccggggacgagggcagcgaggcagacgaggag
caggccttcctcgtctccctctacaagtacatgaaagagaggaagacacccatcgagagg
ataccctacctcggcttcaaacagatcaacctttggactatgtttcaagctgctcagaag
ctgggaggatacgaggtgatcaccgctcgccgacagtggaaaaatgtatacgatgaactg
ggcggtaacccgggaagcaccagcgcagccacgtgcactcggagacactacgaaaggctc
attctcccctacgagaggtacaccaaaggagaggaggacaggcccctgccccccgtcaag
ccccgccggcacgagggcaacggccaggagagcagccccgccgtctccaggacgaaagcc
accgccggcggcaccaagcggtccaaagaggagcagagcagcaggctcaagcctgacaag
gaggcgtccgccatcaaagactccgaatgcccagaggaccagaagaaggaggagctggaa
gagcatgacgatgatgaagatgatgatgaagatgacgatgatgaaaaggagcagaccaaa
ccggaagtgcaaggagagcccgagagcaggagcaccaaggaggaagacgaggaggacgag
gaggaggtggtagaggtcaagccggaggtgaaggaggagcctgacagtgtctgcagcctg
gagagaacggcgccccctcgcagtgcactctgggatggtgggcggcccatcagccctgct
ggtgacttggcggtcgccacccctcaggcggacatgaacgtcatgagatttaaagacgat
gaagtgtttgcggtggccgctcccgccaaatctgtccactacaccgttaccaacccgtgg
cagtcgggggtgggcgagtttgccgtgccccctctgctgagcaagatgggcatcccggag
cctgctgggacgaaagagaaccagtgccatgtgggaatggtgctgcccaccctgcagcaa
cgaccctcccttcagcccctcctggctccagagatccccacggagcgggccgagctgccc
agcagagaggaggcctcattcagctactctcccctcctgtaccccaaggccaaccctggt
atcatgtcccccttggccaagaagaagctcctctctcaggtcagcggaacggccctttcc
aacaactactcctttgggccgccgcctccactcatccccaataaagcctcgggtctcggg
gcagagggggcggaggaggccttgtcagcgccaggatcgctggcctcgtccgggtcggag
ggtgggttcatcagcaggccgtctgtgatccagcatgcccagagcttcaggccccatggg
tgtgtggaggaactgagaccccccaacaaagaggcattgcagagggatggtagtggggtg
tcgttgtcggagccttactccacccaccaccacccacacccccacccccacccccacctc
catccccaccctcatgctcatcctcacccccacccgcatgctcatcctcatccccaaccc
cagcacggcccaacagttgaaccatacctactgagggcggagtcgcatggcggaatggag
aagcctccagacacgccccggccaggccacgcccctagttttctcggtgacttttactcg
tccccgcacctgcacaatctgtacaggcaggcggagcaccacctgggcaaggagcacctg
agcaaatacctgcacagggaggcctttccaagagactgtgagagcacaccaggctttcct
tcgggccagcatcagccgcctccggacagtattggtctggtgtacggggtctgcctgacc
cagaaagacaaactcccctcagggggggaaaggaccacggaggaccaacccacagacttg
agcctgccgaagtgctcccctcccaaaccgcccccttcctctccctccttgtgcagtctg
tcccatccacccatcatccctcctcaggacttgaagttgaccaacacttccctcccctac
cagaccgccagcgggcagggctccagtctggactaccaccccagggcttgtcgggttccc
ccgatgaccatatccgcccccaagaatccaacagagccccttccgcaccatcaaccactc
cctcggggccttgacaaggcctcgcacaacggacggccagaggagccgaacgtcggattc
aaggtggaggaactggcgcgacccatcctgggcacaaagagctgcccgcagaacgttggt
gccgctcggcccctgaagagaccactaggggagctagagagcggactcccggagaagaag
gtgcgcgccgtgacgcccatgcactgttccatgccaagggaggtcccctgcaagcaacgt
acgccgagtcccgcggcggaaccggtgaagccagcgaccccaacaccgcctcatgccaca
ctcatcaatggatacgccccagagagccacaaataccccctccataccccacacatattc
catggcctgtacccaggggcctttgtgtctcagatgcaggacatgtgcgacggcatgggt
ggcccagtgcctgctgggtactctcaccagttgcagtacttgaagaaccaggccgtcctc
tctccgctcgtccctcccttcgccatccattccttcatgatgcagagacaactattggct
caggccgctgccagccccgcccacctctaccaacatccaatgggggcatcctacggggac
ctgctgcatcacggcctataccccatgtccgcccttaaccaccagcccgccttcagtccc
ccgcaacttcaacaccccagcaccaaactgtcctag
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