Clupea harengus (Atlantic herring): 105910511
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Entry
105910511 CDS
T09045
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105910511 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105910511 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
char04031
]
105910511 (rhobtb1)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105910511 (rhobtb1)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
105910511 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
105910511
NCBI-ProteinID:
XP_012694691
Ensembl:
ENSCHAG00000002968
UniProt:
A0A6P3WBT5
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All DBs
Position
23:15515469..15534136
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AA seq
714 aa
AA seq
DB search
MDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYM
EIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKPGDILPPESGREVAKELGIP
YYETSVFDQFGVKDIFDNAIRAALISRRHLQFWKSHLRKVQKPLLQAPFLPPKAPPPLIK
IPDGPGTHINRDGPRQLLDSPLCADVMFVLQEHARIFSHRIYLSTSSSKFYDLFQMDLSE
ESHCLVVTDRIRGGSGSGGRGAGGGGGGGSVSGGNPRDAFLMRTLSLDTEEDASSVSDLS
PCSLRASKSDGTLRMFSFSGKHRRTKLSLASWSKAFYSIHRETVANPVTGAPAPMTVVKM
DCSIQLGPFSAVLRFLYTGELDEDEPDLMKVAQIAEILEVFDLRMMVENIMNKEGFMNQE
ITKAFHVRKANRIKECLTKNKFTDVIFRLDDGTINAHKPLLISSCDWMGALFGGSFMESS
NNEVSTPSTSRACMQAVLEYLYTNQISPMVDLDPMELIALANRLCLPRLIALTEQYAMNA
LVKGSREGHDIDGEVLTYLELAQFHNANQLAAWCLHHICTHYNSVCANYRKEIKCKSLEN
QEYFEKHRWPPVWYLKEEDHYQRMKKEREKEDMVLNKHHSRKCWCFWRTSPAVG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggattacgagcggcccaacgtagagaccatcaagtgtgtcgtcgtgggagacaatgcc
gtagggaagactcgcctcatctgtgcccgagcatgcaacaccacgctgacccagtaccag
ctgctggcgacacacgtgcccaccgtctgggccattgaccagtatcgagtgtgtcaggag
gtgttggagcggtccagagatgttgtggacgaggtgagtgtctccctacgactgtgggac
accttcggagaccaccacaaagacagacgctttgcctacggcaggtcggacgtggttgtc
ctgtgtttctccattgccaaccccaactcgcttcatcacgtcaagaccatgtggtacatg
gagatcaagcacttctgccccaggacgcccgtcatactggtcggctgccagctggacctg
cgctacgctgacctggaggccgtgaatcgcgccagacggcccttggcgaggcctatcaaa
cctggggacatcctgcctccagagagtggccgagaggtggcgaaagagctgggcatcccg
tactacgaaaccagtgtcttcgaccagttcggcgtcaaggacatcttcgacaacgccatc
cgcgccgctctcatctcccgccgccacctgcagttctggaagtcgcacctgcgcaaggtc
cagaagcccctgctgcaggcgcccttccttcccccgaaagcccctccgccgctcatcaag
atccctgacggccctggcacccacatcaaccgcgacggcccgcggcagctgctggacagc
ccgctgtgtgccgacgtcatgttcgtgctgcaggagcacgcgcgcatcttttcccaccgc
atctacctctccacgtcttcctccaagttctatgacctcttccagatggacttgtccgag
gagtcccactgcctggtcgtcaccgacagaatccgggggggcagtgggagcggtggcagg
ggtgcgggcggcggtggcggtggtggtagtgtttccgggggcaaccctcgcgacgccttc
ctgatgcgcacgctgagcctggacacggaggaggacgcgtcgtcagtgtcggacctgtcg
ccgtgctcgctgcgcgcctccaagagcgacggcacgctgcgcatgttcagcttcagcggc
aagcaccgccgcaccaagctctcgctcgcctcctggagcaaggccttctacagcatccac
cgcgagaccgttgccaacccggtgacgggtgcgccggcgcccatgaccgtggtgaagatg
gactgctccatccaactggggcccttcagcgccgtcctgaggttcctgtacacgggcgag
ctggacgaggacgagccggacctcatgaaggtggcccagatcgccgagatcctggaggtg
ttcgacctgaggatgatggtggagaacataatgaacaaggagggcttcatgaaccaggag
atcaccaaggcgttccacgtgaggaaggccaaccgcatcaaggagtgtctcaccaagaac
aagttcactgatgtcatcttcaggttggacgatggcaccatcaacgcccataagcctttg
ctgatctccagctgcgactggatgggggccctgttcggcggctccttcatggagagctcc
aacaacgaggtctccacccccagcaccagccgcgcgtgcatgcaggccgtgctggagtac
ctctacaccaaccagatctctcccatggtggacctggaccccatggagctgatcgccctg
gccaacaggctgtgccttcctcgcctcatcgctctgacagaacagtatgctatgaatgca
ctggtaaaaggctcacgagaagggcacgacatagacggagaggtgctgacctacctggag
ctggctcagttccacaatgctaatcagctagctgcctggtgcctgcatcacatctgtaca
cactacaacagtgtttgtgccaattaccgcaaagaaatcaagtgcaaatcactagagaac
caggagtactttgagaagcaccgctggccgcccgtgtggtacctgaaggaggaggaccac
taccagcgtatgaagaaggagagagagaaggaggacatggtcctcaacaagcaccactcc
cgcaaatgctggtgcttctggcgcacctcgcccgctgtagggtga
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