Clupea harengus (Atlantic herring): 105910575
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Entry
105910575 CDS
T09045
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105910575 (hps1)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
105910575 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
105910575
NCBI-ProteinID:
XP_031435240
Ensembl:
ENSCHAG00000006731
UniProt:
A0A6P8GK07
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All DBs
Position
13:complement(18491742..18504526)
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AA seq
681 aa
AA seq
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MKCLLVASESAEVLFYWTDPEFHIRVQEQYGPTSDDGEGPQHAFEDRINTLFAPIIISCS
TMVDRLRESYTTFCTESNDIYVLHQFEECLYIAVNGDGEENEDDLRRKIFVIKKLTEVMF
GMVTLSSTLLRKELRPQDTEQRRALWRRLQGLLETYSRLREQDQSFLVEAVERLIHPTLC
EQCIEFLERRLVQQLNSSAERAGEEVQHAFILVHTKLLAFYSSRNASTLSSSDLLTLMLM
VQHLHPSNPEIDDSSPEDIQDTTADPEVFYTPEPSPPEHPADWCSPSVELGRTDMEAPMF
QFVDPDIQMAEDSLQTLQMNPPDPATPTRVFLETTLKEGFFPMMPHSMYSLPLWPGITLV
LITKIPSSQVAMSIYHFLETVAKLEKRLKDGQEGAVPQRGHTPIQDLRSKMDKFIRVLGN
NEIQTSLLQKAWAEFKAKAFSRGGPGLSRQLVPYCRNLHTQLCGVFRQCFVSGSCSTQRL
SPSLQDRALTMVQDKLLDWKDFLLVKSKRNITMVSYLEEFPGLVHFIYVDRAAGQMIAPS
LNMTERASSELGKGPLAQYIKSKVWSLVGTARRYLQKGYTTVTQRDGDYYLCYFLWFENE
TGYKLEVVDIPSPPDSAPIGMLAWDYYRKLLRYYSKSHSSEVVKCYELFTMHLGVIPSDY
VLQHCSQLARKLWEPSRIPLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcctgctcgtggccagcgagagcgcggaggtgctgttctattggaccgatccc
gagttccatattcgcgtgcaagaacagtatggaccaactagcgacgacggcgaggggccc
cagcatgcgtttgaggaccgcatcaacacactcttcgctcccatcattatttcctgcagc
actatggtggaccgcctgagagagagctacacaacattctgcacagagagcaacgacatc
tacgtgctgcaccagtttgaagagtgcctgtacatcgctgtgaatggggatggggaggag
aatgaggatgacctgaggaggaagatcttcgtgataaagaagctgacggaggtgatgttt
gggatggtcacgctcagcagcaccctcctcaggaaagagctgcgtcctcaggacactgag
cagaggagagctctctggcgccgcctgcaaggtctactggagacgtacagccgactgaga
gaacaggaccagagcttcctggtggaggccgtggagaggctgatccaccccaccctgtgt
gagcagtgcattgagtttctggagcggcgtctggtgcagcagctgaactccagcgcagag
agagcaggagaggaggtgcagcacgccttcatcctagtgcacaccaaactactggccttt
tactctagtcggaatgccagcaccctgagctcatctgatctgctcactctgatgttgatg
gtgcagcacctccaccccagcaacccagagatagatgactccagcccagaggatattcag
gacaccacggctgatccagaggttttctacacacctgagccttctcccccagaacaccct
gcagattggtgttctccgtcagtagaactgggcagaacagacatggaggctccaatgttc
cagtttgtggatccagacatccagatggcggaggacagccttcagacactgcagatgaat
cctcctgacccggccacgcccacccgagtcttcctggagacaacgctcaaagagggcttc
tttcccatgatgccacactccatgtactccctccccctgtggccaggaatcacactggtg
ctcatcaccaagattcccagcagccaggtggccatgtccatctaccacttcctggaaacc
gtcgccaagctggagaagaggttgaaggatgggcaggagggggcagtgccacaacgaggc
cacacccctattcaggatctccgcagcaagatggacaagttcatccgggtgcttggcaac
aatgagattcagacatcactgctgcagaaggcctgggcggagtttaaggccaaagccttc
agcagaggaggacctggtctcagcagacagttggtgccttactgtagaaacctgcatacc
cagctgtgtggggtcttcaggcagtgttttgtgtctgggagctgcagcactcagagactt
tcccccagtctacaggacagagctctcaccatggtgcaagacaagctgttggactggaag
gacttcctgctggtcaagagcaagaggaacataactatggtgtcataccttgaggagttt
cctggtctggtccacttcatctatgtggaccgagctgctggacagatgatcgcaccgtcc
ctcaacatgaccgaacgggccagctctgagctaggcaaagggccgctagcacagtacatc
aagagcaaggtgtggagtctagttgggacagcaaggcgctacctgcagaaaggctacacc
accgtcacacaacgagacggagattactacttgtgctacttcctctggtttgagaatgag
acgggctataaactggaggtggtggacattcccagcccgcctgactctgctcccattgga
atgctggcctgggattactacaggaagctgctgaggtactacagtaagagccactccagt
gaggtggtgaagtgctacgagctgttcaccatgcacctcggcgtcattcccagcgactac
gtcctgcagcactgcagccagctagcacgcaagctctgggagccctcgcgcattcccctg
ctctag
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