Clupea harengus (Atlantic herring): 105910586
Help
Entry
105910586 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105910586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
105910586
NCBI-ProteinID:
XP_031436286
UniProt:
A0A6P8GGA9
LinkDB
All DBs
Position
2:550004..574561
Genome browser
AA seq
631 aa
AA seq
DB search
MAPVSMQAPVCLIDNGTDGRMSVQQGALQILEQIQEPVVVVAVVGLYRTGKSFLMNRLAG
KQTGFALGSTIESKTKGIWMWCVPHPSKPGNTIVLLDTEGLGDVDKGDPKNDTQLFSLAV
LLSSSLIYNSRGTIDNRAVEELQFVTELAKFIKVKSCDEDEDDSEFVKFFPSFIWAVRDF
TLERKIGGKDVTEDEYLDFALKLKDGHSKKVNDYNLPRECIRKYFPSRKCFTFPFPTSSP
ENVIRMESLGPSELAPAFLEVADRFCSFVFDQSPVKQLKDGHTVDGRILGHMVKMYVEIF
SSGGVPCLENAVVAMAQLENEDAIKEGLEVYESGLEQLRLYFPVDLKDITSGHQRLTSLA
TEIFMKRSFKDDDGKHMKSLEEALDKLFSRFLLQNEEASVLICQEILAGLSAPLKNKLQQ
GFYTKVGGYQLFCQDMEEIVVKYNSQTHRGEKAEDVLEEFMKQRREESAAILQADQSLSV
KDREICEERERAVFLEQEMRSGQEAQRQLEERMEAQRQSSEERMRQVMDKMQQEQQQQQE
EARRARESMLREQALLLEKGFKEKADVMTRQIEESRRRTQEAQEAKSQEFTRLIEQQDQR
HNEVMTRMKQQQEAMMNRPPRVVHTRSCCIQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgtccatgcaggccccggtgtgtctgattgataatgggacagacgggcgc
atgagtgtccagcagggggcactacagatcctggagcagatccaggagccggtggtggtg
gtggctgtggtggggctctaccgcacggggaagtccttcctcatgaaccggctggctgga
aaacaaacagggtttgcccttggcagcaccattgagtccaaaaccaaaggaatctggatg
tggtgtgtacctcacccctctaaaccaggaaacactatcgttctactcgacacagaagga
ctgggagatgttgacaagggagaccccaagaatgacacacagctcttctctctggccgtt
ctgctgagcagcagtctgatctacaacagcaggggcaccatcgacaacagagctgtggaa
gagctgcaatttgtaacagagctggcgaagttcatcaaagtgaagtcatgtgatgaagat
gaagacgattcagagtttgtgaagttcttcccctcgttcatctgggctgtgagggacttc
actctggagaggaagatcggagggaaagacgtaacagaagatgaatacttagactttgcc
ctgaagctgaaagatggtcactcaaaaaaggtgaatgattacaaccttcctcgggagtgc
atccggaaatacttcccatcccggaagtgtttcaccttcccattcccaacatccagcccg
gagaatgtgatccgcatggagagcctgggcccctctgagctggccccagcgttcctggag
gtcgccgaccgcttctgcagcttcgtcttcgaccagagcccagtgaagcagctgaaggat
gggcacacagtcgatggccgaatccttggtcacatggtgaagatgtacgtggagatcttc
tccagtgggggcgtgccctgtctggagaatgctgtggttgccatggcacagcttgagaat
gaggatgctattaaggaagggcttgaggtctatgagagcggattggagcaactgaggctg
tacttccctgtggacctgaaggacatcacctccggacaccagcgcctcaccagcctggca
acagaaatcttcatgaagcgctccttcaaggatgatgatggcaagcacatgaagtctctg
gaggaggccctcgacaagctgttcagtagattcctgctgcagaatgaggaggcttcggtg
ctgatctgtcaggaaatcctcgcaggtctctctgctccactgaagaacaaactccagcag
gggttctacaccaaagtcggaggctaccagctcttctgccaggacatggaggagattgtg
gtgaaatacaacagccagacccacagaggagaaaaggctgaggacgtgttggaggagttt
atgaagcagaggagggaggagtctgcagccatcctacaggctgaccagagtctgagtgtg
aaggacagagagatctgtgaggagcgagagagagctgtgttcctggagcaggagatgagg
tcgggccaggaggcgcagcggcagctggaggagcgcatggaggcgcagcgtcagagcagt
gaggagcgcatgaggcaggtgatggacaaaatgcagcaggagcagcagcagcagcaggag
gaggcacggcgggccagggagagcatgctgcgggagcaggccctcctgctcgagaagggc
ttcaaggagaaggcagacgtgatgaccagacagatagaggagagcaggaggaggacccag
gaggcgcaggaggccaagagccaggagtttaccaggctgatcgaacagcaggaccaaagg
cacaacgaggtcatgacccggatgaagcagcagcaggaagccatgatgaacagaccaccc
agagtcgtccacacccgttcctgctgtatccagtga
DBGET
integrated database retrieval system