Clupea harengus (Atlantic herring): 105910693
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Entry
105910693 CDS
T09045
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105910693 (ccdc50a)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Others
105910693 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
105910693
NCBI-ProteinID:
XP_031431305
Ensembl:
ENSCHAG00000016131
UniProt:
A0A6P8G7S8
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All DBs
Position
10:complement(13508567..13537015)
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AA seq
603 aa
AA seq
DB search
MADFSIDQENLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNINRSRLVQQDLLVAK
RLQDEEDKRAKDQKQKKHQHLEQTDSEIAQEIQEQLVLQAEQQRQQEEKDAAIARKLQEK
EMKEEKKRQKQLEPKHEEEYYDEKGVHRIPSDTGYPSPENSRKKASDTGRRRYPEYDPPE
LGGPRLHASPGRDRHQDRRGRYPDHLPPEGRERQGEHRRGRGAPAEEREDEPVVRRKERP
LRPPPPSYPTERDRDQEKDRDRRKDKERDRDGWRDGERPRERAKSRDRLEMSESDRDRHR
DRDRDAERDRHGHKRQEELDWSRGRDGHETKDVHRGRGRDWEKERKREKRNHNGHTRSGE
RDQEERTGSWSEDEEARSRLRLPSGPSDVFEEPSSSRSPRRGERRETLDLDDDVQRVRSQ
SRELDSLSSSPLDRGRGGRGEFGVVEAQQGLSRMAVRDQELQELRDLEVARLLQEEELKA
SQMGKRHAQAAQVAQDEEIARMIMEEEKKVFKKSRDREREKPAMDRRKPEGDWKPATEEV
VRPRSREEYDQQRARNHKPSRPARPRTPDYENVESSYGYPEPHYPPRPATRPDAAYKGSY
YKQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttagtatcgatcaggaaaacctgcctggagtaaaagaggtgtgtcgggac
tttgctgtactggaggaccactgcctggcccacaacctgcaggaacaggaaattgagagc
catttggcgtccaacatcaacaggagccgccttgtgcagcaggacctactagtggccaaa
cgtctgcaagatgaggaagacaagagagccaaggaccagaagcagaaaaagcaccaacac
ttggagcagactgacagtgagatagcccaggagatccaggagcagcttgttctacaggca
gagcagcagagacaacaggaggagaaggatgcggctatcgctcgtaaactccaggagaag
gagatgaaagaggagaagaaacgtcaaaagcagctggagcccaaacatgaggaggaatac
tatgatgagaaaggagttcatcgcatcccctctgacacgggctacccctctccagagaat
agccgcaaaaaggcctcagacaccgggcggaggaggtaccccgagtacgacccgcccgag
ctggggggtccccggctccatgcaagccccggcagggacaggcatcaggacaggcggggc
cgctaccctgaccacttgccccccgagggcagggagaggcagggcgagcacaggaggggc
cgaggcgccccggccgaggagcgggaggacgagccggtggtgcgccggaaggagagaccc
ctccgacctccaccgcccagctaccccacagaaagagaccgggatcaggagaaggacagg
gacaggaggaaggataaagagagggatagagatggatggagggatggggagagacccaga
gagagggccaaaagccgcgacaggctggagatgtcggagtccgatagggaccgacacaga
gatcgagatcgtgacgcagagcgggaccgacatggacacaagagacaagaagaactagac
tggtccagaggcagagatggacacgagaccaaagatgtccatagaggccgaggcagagac
tgggagaaggaaaggaagagggagaagaggaatcacaatggtcacacgaggagcggagag
agggatcaggaggagcgcacgggatcctggtccgaggacgaggaggccaggagccgcctg
cgtctcccctcggggcccagtgatgtgtttgaggagcctagcagctctcgctcccccagg
aggggggagaggagggagactctggacctggacgatgatgtccagagggtgcgctctcaa
tctagggagctcgactccctctccagctcccctctggatagaggccgtggaggtcgaggg
gagtttggcgtggtggaggcgcagcagggcctgagccggatggctgtgcgagatcaagag
ctgcaggagctgcgggacctggaggtggcgcgcctcctgcaggaggaggagctcaaggcc
agtcagatgggcaagcgccacgcccaggctgctcaagtggctcaggacgaggaaattgca
cggatgataatggaggaggagaagaaagtctttaagaaatcgcgggaccgagagcgagag
aaaccagccatggacaggagaaaaccagaaggcgactggaagccagcaacagaggaggta
gtgcgacccagatcacgagaggagtatgaccagcagagagcccgcaatcataaaccatcc
aggcctgcccgtccccgcacacctgactatgagaatgtggagtctagttatggctaccca
gagccccattaccctccacggcccgccacccgacccgatgctgcctacaaaggttcctac
tataagcagtga
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