Clupea harengus (Atlantic herring): 105910890
Help
Entry
105910890 CDS
T09045
Name
(RefSeq) calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like isoform X1
KO
K13755
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase [EC:
3.1.4.17
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00230
Purine metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
105910890
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105910890
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.17 3',5'-cyclic-nucleotide phosphodiesterase
105910890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDEase_I
PDEase_I_N
Motif
Other DBs
NCBI-GeneID:
105910890
NCBI-ProteinID:
XP_031439404
UniProt:
A0A6P8GJP9
LinkDB
All DBs
Position
17:14603698..14667937
Genome browser
AA seq
731 aa
AA seq
DB search
MSFCLVDYFDMESPTKEIEDFENNSLKYLQADQIEKIWLRLRGLRKYKKTSQRLRCLVKQ
LERGEASVVDLKKNLEYAATVLESVYIEETRRLVDTEDELSDIQSDSVPSEVRDWLAATF
TRQMGLMLRRTEEKPRFRSIVHAVQAGIFVERMYRRTSNMVGLSYPPSVITVLKHVDTWT
FDVFALNDASGEHALKFIFYELLTRYDLINRFKIPISALVSFVEALEVGYTKHKNPYHNL
MHAADVTQTVHFFMLKSGMVHWMTELEIFAMIFAAAVHDYEHTGTTNNFHIQTRSDMAIF
YNDRAVQENHHVSAAYRLLQDDDEMNILYNLSKDDWRELRALVVEMVLATDMSCHFQQIK
AMKNFLQQPEAIDKTKALSLLLHTADISHPAKNWDLHHRWTTSLLEEFFRQGDKEAELGL
IFSPLCDRKSTMVAQSQIGFIDFIVEPTFTVLTDMTEKIVTPLIDEASQSSLAGFRRARS
GLNNISPDGKRTSIKSTGSESSTSLNCSLLAVDFKSFKATWNEEVQQNRERWKAEATKDL
EEKAKKEAEEKAKKEAEEKAKLEETEGKESKTEEGKEAEASEPAQDKDTRAAKETAESTD
KDKEEKEKEKTEERKPEPAELAQAMKDPVEQKPKEAEGNKDPGGSGGPKLEPETQEASNP
RQPATHSSTDGSRQGQNGEVPKEIDSPESEDSKKKTSSSDDSDDDGQRNRGNTPGSLAAL
SASAAAAGDAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttgtttggtcgactacttcgacatggaatcacccaccaaggagatcgaggat
ttcgagaacaactcgctgaagtatctgcaggcggaccagatcgagaagatctggctgaga
ctgcgtggattgaggaaatacaagaagacgtcgcagaggttgcgatgcctggtgaagcag
ttagagaggggcgaggcgtccgtggtggacctgaagaagaacctggagtatgccgccacg
gtcctggagtcggtgtacatcgaggagacgcggcgtctggtggacaccgaagatgagctc
agcgacatccagtcggactccgtcccgtcggaggtgcgtgattggctggccgccaccttc
acgcgtcagatggggctgatgctccggcggacggaggagaagccacgcttccgcagcatc
gtgcacgcagtgcaggctgggatatttgttgaaagaatgtaccgacggacctccaacatg
gtgggactaagctatcctcctagcgtgatcaccgttctcaagcacgtggacacgtggaca
tttgatgtgttcgctctgaatgacgcaagcggagagcatgcactgaaattcatcttttac
gagctgctcacaagatatgacttaatcaaccgcttcaagatccccatctctgcactggtg
tccttcgtagaggcgctggaggtgggctacaccaagcacaagaacccctaccacaacctg
atgcacgcggcagacgtcacgcagaccgtccacttcttcatgctgaagtctggcatggtg
cattggatgacggagctggagatctttgccatgatctttgccgccgctgtgcatgattac
gaacacaccgggaccactaacaactttcacatccagaccaggtcagacatggcaatcttt
tacaacgaccgcgcggtgcaggagaaccaccacgtgagcgcagcctatcgcctcctacag
gacgatgacgagatgaacatcctgtacaacctgtccaaggacgactggagagagttgcgc
gccttggtggtggagatggtgctggccacagacatgtcctgtcacttccagcagatcaag
gccatgaagaacttcctccagcagcccgaggcgattgacaaaaccaaggccttatcgctg
ctgctccacacagcggacattagccacccggccaagaactgggacctgcaccaccgctgg
accacctcactgctggaggagttcttccgacagggtgataaagaggctgagctaggactg
atcttctctccactctgtgaccgcaagtccaccatggtggctcagtctcaaatcggtttt
atcgatttcattgtggagccgaccttcactgtgctgacggacatgacggagaagatcgtg
acaccactcatcgacgaggcctcgcagtccagcctggcaggattccgccgcgccagatct
ggcctgaacaacatctcccccgacgggaagcgcaccagcatcaagagcacaggctcggag
agcagcacctcgctcaactgctccctgctcgccgtcgacttcaagagcttcaaggccacc
tggaacgaggaggtgcagcagaacagagagaggtggaaggccgaggcaaccaaagacttg
gaggagaaggccaaaaaggaggcagaggagaaggccaaaaaggaggcagaggagaaggcc
aagctggaggagacagaagggaaggagagcaagaccgaggagggcaaggaggcagaggca
tcagagcccgctcaggacaaggacacaagagcagcgaaagagacagcggagagcacagac
aaggacaaagaggagaaggagaaagagaagacggaggagaggaaaccagagccggcggag
ctcgctcaggcgatgaaagaccccgtggagcagaagcccaaggaggccgaggggaacaaa
gacccgggggggtccggtgggccgaaactcgagcccgagacgcaggaggcctccaaccca
aggcagccggccacccacagcagcacggacggcagccggcaaggccagaatggtgaagta
cccaaggagatagactcacctgagagtgaggacagtaagaaaaagacatcaagttcagac
gattccgacgacgacggacagagaaaccgtggcaacacacctggttctctggcggcctta
tcggcgtctgcggccgccgccggcgatgcaaactaa
DBGET
integrated database retrieval system
