KEGG   Clupea harengus (Atlantic herring): 105910903
Entry
105910903         CDS       T09045                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105910903 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105910903 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105910903 (vim)
   04147 Exosome [BR:char04147]
    105910903 (vim)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     105910903 (vim)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     105910903 (vim)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105910903 (vim)
  Exosomal proteins of other cancer cells
   105910903 (vim)
SSDB
Motif
Pfam: Filament Filament_head TPR_MLP1_2 KIF21A_4th TolA_bind_tri FKBP15 DUF6212 DUF4515 ZapB DUF4407 DUF1664 Sec10_N
Other DBs
NCBI-GeneID: 105910903
NCBI-ProteinID: XP_031440222
Ensembl: ENSCHAG00000021373
UniProt: A0A6P8GXL7
LinkDB
Position
17:14543115..14549499
AA seq 455 aa
MSRSGVQSSYNRMFGRPEQRPSTTRSTYSSRQHFSPVRSRTSFSVSSAPHSIFATKTARL
RSNAPMLKLSSDNVDFALSDAITTEFKANRTNEKAEMQHLNDRFASYIDKVRFLEQQNKI
LLAELDQLRGKGMSRVGDLYEEEMRELRRQVDQLTNEKARVELDRDNFGDDIQRLREKLQ
DELLQKEDAENNLQGFRQDVDNAALARLDLERKMESLQEEIIFLKKLHDEEMADLQAQIQ
QQHVQIDMDVAKPDLTTALRDVRMQYESLATKNIQDSEDWYKSKFADLSEAAARNNDAIR
LAKQESNDYRRQVQALTCEVDALKGTNESLERQMREVEDSFSNEAGGYQDNIARLEEDIH
NMKGEMACHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPMPNFSSFNLRESMMEV
RPMMDTMQRKVLIKTIETRDGEVINESTQNHDDLE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcaaggtccggggtccagtcctcttacaataggatgttcggtaggcccgaacagcgg
ccctccactactcgttctacttactcaagtcgccaacacttcagtccagtacgctcccgg
acatctttcagcgtgtcgtccgctccccatagcatctttgccacaaagaccgccaggctc
cgcagcaatgcgcccatgctcaaactcagcagcgataatgtggactttgctctgtccgat
gccatcacaacggagttcaaagctaaccggactaatgaaaaggcagagatgcagcacctc
aacgacaggtttgccagctacatcgacaaggttcggttccttgagcagcagaacaagatt
ctccttgcagagttggatcagcttaggggcaaaggcatgtcccgcgtcggggacttgtat
gaggaggagatgagggagctgcgccgtcaggtggaccagcttacaaacgagaaagctaga
gtcgagttggaccgggacaacttcggagatgacatccagaggctccgagagaagctgcag
gatgagcttcttcagaaagaagatgcggaaaacaacctccagggcttcagacaggatgtg
gataatgctgccctggcccgtcttgacctggagaggaagatggagtccctgcaagaggag
atcatcttcctgaagaagcttcacgacgaggagatggctgacctccaagctcagatccag
cagcagcatgttcagattgacatggacgtggcaaaacccgacttgaccaccgcgctgcgg
gacgtcaggatgcagtatgagtcgctggctaccaagaacatccaggattcggaggactgg
tacaagtccaaatttgctgacctgtctgaagctgctgctcgtaataatgacgccatccgt
ctggccaagcaggagtccaatgactaccgccgacaggtgcaggctctcacctgtgaggtg
gatgccctaaaaggcactaatgagtcactggaacgtcagatgagggaggttgaagacagc
ttctccaatgaggcaggtggttaccaggacaacattgcccgtctggaggaagacatccac
aacatgaagggcgagatggcatgccacctgcgtgagtaccaggacctgctcaacgtcaag
atggcgctggacatcgagatcgccacctacaggaagctgctggagggcgaggagagcaga
atcaccactccaatgcccaacttctcttcctttaatttgagagaatccatgatggaagtc
agaccaatgatggacaccatgcagaggaaggtgttgatcaagactattgagaccagagat
ggagaagtgatcaatgaatcaacccagaaccacgatgacctggaatga

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