Clupea harengus (Atlantic herring): 105910971
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Entry
105910971 CDS
T09045
Symbol
tob1a
Name
(RefSeq) protein Tob1a
KO
K14443
protein Tob/BTG
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105910971 (tob1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105910971 (tob1a)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105910971 (tob1a)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105910971 (tob1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
T2SSM
TFIIA
SinI
Motif
Other DBs
NCBI-GeneID:
105910971
NCBI-ProteinID:
XP_012695193
Ensembl:
ENSCHAG00000012937
UniProt:
A0A6P3WCM0
LinkDB
All DBs
Position
1:31858395..31862117
Genome browser
AA seq
342 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNDN
GLELDKEIKNSFNPEAQVFMPISEPPSGASPTSSSPSPPFGQSASVSPTFMPRSTQPLTF
TTATFAATKFGSTKMKSSGRNGGGGAGSGKVARTSPTNLGLNVNNLLKQKAISTSMHSLY
GLGLGAPQQQQQQQQQQQQPKPSALSPNAKEFVFPSLQGQGSPSAVFPGDGSLSLGPLPY
NNAFDVFAAYGGLNEKSLMDGLNFSLNNMQYSNQQFQPVMAN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagcactcaactttataatttcttatttgtacaacaagctg
ccacgacgacgcgtgaacatcttcggcgaggagcttgagcgtcagttgaaacagaagtat
gagggacactggtatccagacaagccatacaaagggtccggtttccgatgcatacatgtc
ggggagaaggtggaccctgtggtggagcaagctgccaaagagagcgggttggacatcgag
gatgtccgcaacaacctgcctcaggacctcagtgtgtggattgaccctttcgaggtgtcc
tatcagatcggggagaaggggcccgtgaaggtgctctacgtggacgatagcaatgacaac
gggctggagctggacaaggagatcaagaacagttttaaccctgaggcacaggtcttcatg
cccatcagcgagcctccatctggggcctcgcccacgtccagctccccctcccctcccttt
ggccagtcggcctcggtcagccccaccttcatgccacgctccacccagcctttaaccttc
accactgccacctttgccgccaccaagttcggctccaccaaaatgaagagcagtggccgc
aacggcggtggcggcgctggcagcggcaaggtggcccgcacctctcccaccaacctgggc
ctgaatgtgaacaacctgctgaagcagaaagccatttccacgtccatgcactcgctctac
ggcctcggcctgggtgcgccgcagcaacagcagcagcagcagcagcagcagcagcagccc
aagccctccgccctctcccccaacgccaaggagtttgtgttccccagcctgcagggccag
ggcagcccaagcgcagtgttccctggggacggctcccttagcctgggtcctctcccatac
aacaatgcctttgacgttttcgcggcctacgggggcctcaacgagaagtccctcatggat
ggcttgaatttcagcttgaacaacatgcagtattctaaccagcaattccagccagtcatg
gccaactag
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integrated database retrieval system