KEGG   Clupea harengus (Atlantic herring): 105910971
Entry
105910971         CDS       T09045                                 
Symbol
tob1a
Name
(RefSeq) protein Tob1a
  KO
K14443  protein Tob/BTG
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105910971 (tob1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105910971 (tob1a)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105910971 (tob1a)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     105910971 (tob1a)
SSDB
Motif
Pfam: BTG PAM2 T2SSM TFIIA SinI
Other DBs
NCBI-GeneID: 105910971
NCBI-ProteinID: XP_012695193
Ensembl: ENSCHAG00000012937
UniProt: A0A6P3WCM0
LinkDB
Position
1:31858395..31862117
AA seq 342 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNDN
GLELDKEIKNSFNPEAQVFMPISEPPSGASPTSSSPSPPFGQSASVSPTFMPRSTQPLTF
TTATFAATKFGSTKMKSSGRNGGGGAGSGKVARTSPTNLGLNVNNLLKQKAISTSMHSLY
GLGLGAPQQQQQQQQQQQQPKPSALSPNAKEFVFPSLQGQGSPSAVFPGDGSLSLGPLPY
NNAFDVFAAYGGLNEKSLMDGLNFSLNNMQYSNQQFQPVMAN
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagcactcaactttataatttcttatttgtacaacaagctg
ccacgacgacgcgtgaacatcttcggcgaggagcttgagcgtcagttgaaacagaagtat
gagggacactggtatccagacaagccatacaaagggtccggtttccgatgcatacatgtc
ggggagaaggtggaccctgtggtggagcaagctgccaaagagagcgggttggacatcgag
gatgtccgcaacaacctgcctcaggacctcagtgtgtggattgaccctttcgaggtgtcc
tatcagatcggggagaaggggcccgtgaaggtgctctacgtggacgatagcaatgacaac
gggctggagctggacaaggagatcaagaacagttttaaccctgaggcacaggtcttcatg
cccatcagcgagcctccatctggggcctcgcccacgtccagctccccctcccctcccttt
ggccagtcggcctcggtcagccccaccttcatgccacgctccacccagcctttaaccttc
accactgccacctttgccgccaccaagttcggctccaccaaaatgaagagcagtggccgc
aacggcggtggcggcgctggcagcggcaaggtggcccgcacctctcccaccaacctgggc
ctgaatgtgaacaacctgctgaagcagaaagccatttccacgtccatgcactcgctctac
ggcctcggcctgggtgcgccgcagcaacagcagcagcagcagcagcagcagcagcagccc
aagccctccgccctctcccccaacgccaaggagtttgtgttccccagcctgcagggccag
ggcagcccaagcgcagtgttccctggggacggctcccttagcctgggtcctctcccatac
aacaatgcctttgacgttttcgcggcctacgggggcctcaacgagaagtccctcatggat
ggcttgaatttcagcttgaacaacatgcagtattctaaccagcaattccagccagtcatg
gccaactag

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