Clupea harengus (Atlantic herring): 105910995
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Entry
105910995 CDS
T09045
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105910995
04121 Ubiquitin system [BR:
char04121
]
105910995
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
105910995
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105910995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_ZNF462_11
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
105910995
NCBI-ProteinID:
XP_031414703
UniProt:
A0A6P8EFC4
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All DBs
Position
21:complement(25117264..25120128)
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AA seq
673 aa
AA seq
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MEPKSEELEAGEHQLVSHPRAKSKVWKYFGFDMEEDEVGKRAHCRLCLAQIGYSGNTTNL
YAHLQRHHPDAFLEFEKSSGDSPQQLQQLQNPLAPPQGCARQNQNPLAPPQTCTRQNSQE
NRRQAEVSSAVLGFLCEGLHPVSTADEPFFQAMLRTLDPRCAPPTAADLLSQALPQRHQQ
VRAGVSAELSGLSCCGVSADLWRSETHGHSYVTLYAHGLLAQTPPLPSGPLRLLSRCLKT
FEVPADSPAEGITRALYEVFMEWGVAQRVRGATTSGSPDVLKACAQLDLPVLMPCFAERL
NRGVHAASLVPGVQALLARCRRLVDYFQQSVVAAYMLQERLKQQGRSAGALVGERPGCWT
ATLTMLQRLRENQPAVTSVLLEDANNQALLLAAGEWALLDGLLQLLRALRSAADMFCGSA
CPSISMLKPVLHMLLSTALRRRDGDPAELLDARRAVAGALEEAYQRPAQLDMFLKVASFL
DPRYKRLPFLTAAERAQVEARVLEEAAALYQRHTPSAQQPAAADDEPPNKKQALGASSSA
PPTTGDAANPLAVIFCQSGAAETQEEFQAQAEEELSNFKAQKVLGLNEDPLRWWSDRALL
FPMLPRVLQKYWCVPATSAPAHRLFGPAGNVLWGKRNRLDPEHVDQQVFLYENTRTYYEP
EPSCTDKDTTGLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagagtgaggagctggaggcgggcgagcaccagctggtgtcgcacccgcgc
gccaagagcaaggtgtggaagtacttcggcttcgacatggaggaggacgaggtgggcaag
agggcccactgccgcctgtgcctggcgcagatcggctactcgggcaacaccaccaacctg
tacgcccacctgcagcggcaccaccccgacgccttcctggagttcgagaagagcagcggc
gactccccccaacagctgcagcagctgcagaaccccctcgccccccctcaggggtgcgcc
cggcagaaccagaaccccctcgccccccctcagacgtgcacgcggcagaactcccaggag
aaccggcgccaggcggaggtgtcgtccgcagtgctgggcttcctgtgcgaggggctgcac
cccgtctccacggcggacgagcccttcttccaggcgatgctgcggacgctggacccccgc
tgcgccccccccaccgccgcggacctcctctcgcaggcgctgccccagcggcaccagcag
gtgcgggcgggggtgtcggcggagctctcggggctgagctgctgcggcgtgtcggcggac
ctgtggcgcagcgagacgcacgggcacagctacgtcaccctctacgcccacgggctgctg
gcgcagacgccgccgctcccttcggggcctctccgcctgctcagccgctgcctgaagacg
ttcgaggtgccggcggacagcccggcggagggcatcacgcgggcgctctacgaggtgttc
atggagtggggcgtggcgcagagggtgcggggcgccaccaccagcggctcgcccgacgtg
ctgaaggcctgcgcccagctcgacctgcccgtgctcatgccctgcttcgccgagcggctc
aaccgcggcgtccacgccgcctccctggtgccgggcgtccaagcactgctcgcccgctgc
cgccggctggtggactacttccagcagtcggtggtggcggcgtacatgctgcaggagcgc
ctgaagcagcaggggcggtccgcgggcgcgctggtcggagagaggccgggctgctggacc
gccactctcaccatgctccagcgtctgcgggagaaccagccggccgtcacctcggtgctc
ctggaggacgccaacaaccaggcgctgctgctggccgcgggcgagtgggcgctgctggac
gggctgctgcagctgctgcgggcgctgcggtcggccgccgacatgttctgcggctcggcc
tgcccctcgatcagcatgctgaagcccgtcctgcacatgctgctcagcacggcgctgcgg
cggcgcgacggggaccccgccgagctgctggacgccaggcgggcggtggccggcgccctc
gaggaggcctaccagcggccggcgcagctggacatgttcctgaaggtggccagcttcctg
gacccgcgctacaagcggctgccgttcctcacggccgccgagcgcgctcaggtggaggcg
cgcgtgctggaggaggccgccgccctctaccagagacacaccccctccgcgcagcagccc
gccgccgcggacgacgagccgcccaataagaaacaggctctcggcgcttcttcgtcggcc
cctcccaccaccggcgacgctgccaacccattggccgtgatcttctgccagtcgggggcg
gccgagacccaggaggagttccaggcgcaggccgaggaggagctcagcaacttcaaggct
cagaaggttctgggcctcaacgaggacccgctgcgctggtggtccgaccgggccctgctc
ttccccatgctgccccgggttctgcagaagtactggtgcgtcccggccaccagcgccccg
gcccaccgcctgttcggacccgccgggaacgtgctgtggggcaagaggaaccggctcgac
ccggaacacgtggaccagcaggtgttcctctacgaaaacacaagaacctactacgagccg
gaaccgtcatgcaccgacaaagacacgacgggattggcttag
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