Clupea harengus (Atlantic herring): 105911072
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Entry
105911072 CDS
T09045
Symbol
nr5a1b
Name
(RefSeq) steroidogenic factor 1b isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105911072 (nr5a1b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105911072 (nr5a1b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
105911072 (nr5a1b)
Nuclear receptors [BR:
char03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
105911072 (nr5a1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TREH_N
NPL4
Motif
Other DBs
NCBI-GeneID:
105911072
NCBI-ProteinID:
XP_012695301
Ensembl:
ENSCHAG00000009743
UniProt:
A0A6P3WCL9
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Position
12:complement(23805550..23817646)
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AA seq
474 aa
AA seq
DB search
MEYSYDVDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKT
QRKRCPFCRFQKCLSVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRASGLKM
ESTPPLVSPTQTDYSFSGSLQGLPPVPKNIMPATSNTTTPTDYDRSLYGHASLGMTMPTH
GPLLSQYQYTSFPSRSIKSEYPDHYTSSPDSVVGYTYPEQAYPTGSPQQGCVPPLVLEFL
RCDPDEGQVQSKIVAHLQQEQNSRGKHDKLSTFCLMCHMADQTLFSIVEWARSCIFFKEL
KVGDQMKLLHNCWSELLVLDYVSRQVQYGKEDSVLLVTGQEVQIAHIAAQAGATLTSLVQ
RGQELVGKLQALQVDRREIACLKFLILFNPDVKLLENQPYVEGVQEQVNAALLEYTLCSY
PQYLDKFSQLLLRLPELRGLSTQAEDYLCYKHLSGEVPCNNLLVEMLHAKRACV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagttacgatgttgatctggaagagttatgtcctgtttgtggagacaaggtg
tccggataccactacggactactgacctgcgagagctgcaagggatttttcaaaaggacg
gttcagaataacaagcggtacacttgtgcagaaagccaggactgtaaaatagacaaaaca
cagaggaaaaggtgtccattttgtcgattccagaaatgcctcagcgttggaatgcgatta
gaagctgtccgcgcggaccggatgcgcgggggccggaacaagtttggccctatgtacaaa
cgggacagagccttaaagcagcagaagaaagctttgatacgagccagcggcctcaagatg
gagtccaccccgccgttagtttcccccacgcagacggactatagcttctccggcagcctc
caggggttgccgccagttcccaagaacatcatgcccgccacctcaaacaccaccacaccc
acagactatgaccgcagcttgtatggtcacgcatcgctgggcatgaccatgcccacgcac
gggcccttactgagccagtaccagtatacctccttccctagtcgatctatcaagtccgag
tacccagatcactacacaagctccccggactctgtggtcgggtacacgtacccggagcag
gcatacccaaccgggtcacctcagcagggttgcgtgccacccttggttctggagttcctg
cgttgcgacccagacgagggccaagtgcagagcaagatcgtggcccatctgcagcaggag
cagaacagccgggggaaacacgacaagctcagcaccttctgcctcatgtgccacatggcg
gaccagacgctcttctccatcgtggagtgggcccggagctgcatcttcttcaaagagctc
aaggttggggaccagatgaagctgctgcataactgctggagcgagctgctggtgctggac
tacgtctccaggcaggtgcagtacggcaaagaggacagcgtgctgctggtcaccgggcaa
gaggttcagatagcgcacatcgcggcccaggcgggcgctaccctcaccagcctggtgcag
agggggcaggagctggtgggcaagctgcaggccctgcaggtggaccgccgagagatcgcc
tgcctcaagttcctcatcctcttcaaccctgacgtgaagctgctggagaaccagccgtac
gtggagggcgtgcaggagcaggtgaacgcggcgctgctggagtacacgctgtgcagctac
ccgcagtacctggacaagttcagccagctgctgctgcgcctgcccgagctgcgggggctg
agcacccaggcggaggactacctctgctacaagcacctgagcggagaggtgccctgcaac
aacctgctcgtcgagatgctccacgccaagagggcgtgtgtttga
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