Clupea harengus (Atlantic herring): 105911085
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Entry
105911085 CDS
T09045
Symbol
lhx2a
Name
(RefSeq) LIM/homeobox protein Lhx2 isoform X2
KO
K09373
LIM homeobox protein 2/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105911085 (lhx2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
105911085 (lhx2a)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105911085
NCBI-ProteinID:
XP_012695317
Ensembl:
ENSCHAG00000009120
UniProt:
A0A6P3WD88
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Position
12:23705611..23714989
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AA seq
415 aa
AA seq
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MEVLAFRSEETTCSSTTMLFHGLPGGEMQGVIDEMDRRGKGDSAGISSAIDMGETEASLT
SINGDRVALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCK
DDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMRDSLV
YCRLHFETLIQGEYQAHFNHTDVSTVKGLGAGTANSLGLPYYNGVATVQKGRPRKRKSPG
PGAELAAYNAALSCNENDGDHLDRDSHYSSGQKSKRMRTSFKHHQLRTMKSYFAINHNPD
AKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQESGGMDKVSDGSTLPGGSPSGPPS
ELSNCSMSPSSTPSALTDLTSPSMPNVNPVLTAVPGGLDPHDSMSPSQTTLTSLF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttggcttttagatctgaggaaaccacgtgttcttccacaacgatgctcttt
cacggcctccccggaggcgagatgcaaggagttatcgatgaaatggaccggagaggcaaa
ggagactctgctggaatcagctcggccatcgacatgggcgaaaccgaagcgagcctaacg
tctatcaacggcgaccgagtggccttgtgtgccggctgcggggggaagatttccgaccgc
tactacctgctggcggtggacaaacagtggcatatgcgctgcctcaaatgttgcgagtgt
aagctcaacctggagtccgagcttacctgcttcagcaaagatggcagcatatactgcaag
gacgattattacaggagattttccgtgcagagatgtgcccggtgccaccttgggatatcg
gcatcggagatggttatgcgggcgagagacttggtctatcacctgaactgtttcacttgc
accacatgcaacaaaatgcttacaactggagaccatttcggaatgcgtgacagcttggtg
tactgtcggctacacttcgagacattaatacaaggggaatatcaggcgcatttcaatcac
acggacgtatccacggtcaagggactcggtgcaggcactgcgaactctctgggacttccg
tactacaacggagtggcaacagtgcagaaagggagaccacggaaaagaaaaagtcccggg
cccggagcagagctggcggcttacaatgcagcattgagttgcaatgagaatgatggggac
cacctggaccgcgactcacattacagctcaggacagaagtccaaacgcatgcggacgtcc
ttcaagcaccaccagctaaggaccatgaagtcttactttgccatcaaccacaaccctgat
gccaaggacctcaaacagctggcccagaaaactggtctcacgaaacgggtactacaggtg
tggtttcagaatgcgcgtgccaagttcaggcggaacctgctccgccaggagagtgggggc
atggacaaggtgtcagacgggtcaaccctgccaggcggctcgccctcggggcccccgtcg
gagctgtccaactgctccatgagcccctccagcacaccctcggccctcaccgacctcacc
agcccctccatgcccaacgtcaaccccgtcctgacggccgtgccggggggtctggacccc
cacgactccatgagcccgtcccagaccaccctcaccagcctcttctga
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