Clupea harengus (Atlantic herring): 105911122
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Entry
105911122 CDS
T09045
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9 isoform X1
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105911122 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105911122 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105911122 (cdk9)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
105911122 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
105911122 (cdk9)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: CMGC group
CDK family
105911122 (cdk9)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
105911122 (cdk9)
Brd4/P-TEFb complex
105911122 (cdk9)
7SK RNP complex
105911122 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
105911122
NCBI-ProteinID:
XP_012695360
Ensembl:
ENSCHAG00000007237
UniProt:
A0A6P3WCU5
LinkDB
All DBs
Position
12:23564433..23568722
Genome browser
AA seq
396 aa
AA seq
DB search
MQREKTGNSGAGDKPERDVAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKGKISTQFNRYK
GSIYLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVL
ITRDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG
CIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKKYELYQKMELPKGQKRKV
KDRLKFYVKDPYALDLIDKLLVLDPNQRVDSDDALNHDFFWSDPMPSDLKNMLSTHNTSM
FEYLAPPRRRSHMPQQPANQNRNPTTTSQTEFDRVF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagaaaaaaccggaaactccggcgccggcgataagccggagcgggatgtcgcc
atcatgtccaagtattacgatggtgtggaatttcccttctgtgacgagttttcaaaatat
gaaaagctggcaaaaatcggccaggggacgtttggggaggtgttcaaagccaaacacagg
cagactgggaaaaaggtggccttgaaaaaagtgctaatggagaatgagaaagaagggttc
cccatcactgctcttcgagaaatcaagattctacagcttctcaaacatgagaatgttgtc
aacttgattgagatctgtagaacgaaaggtaaaatatccacccagttcaaccgatacaag
ggcagcatatacttggtatttgacttctgtgagcatgacctggcgggcttgctcagcaat
gctaacgtgaagttcaccctcgcggagatcaagaaggtgatgcagatgttgctgaatgga
ctctactacatccacagaaacaagatcctgcaccgggacatgaaggcagccaatgtgctc
atcacacgagacggcgtccttaagctggcagattttggcttggcgagggccttcagctta
gccaagaacagccagggcaaccgctacaccaaccgagtggtcaccctgtggtacaggcca
cctgagctccttctgggggagcgagactacggccctcccattgacctctggggagccggg
tgcatcatggcggagatgtggaccaggagccccatcatgcagggcaacacagagcagcac
cagctcacgctcatcagccagctgtgcggttccatcaccccagaggtctggccaggcgtg
gacaagaagtatgaactctatcagaagatggaactacccaaaggacagaagaggaaagtt
aaagaccgactgaagttctacgtcaaagacccttacgccttggacctgatcgacaaactt
cttgtcctcgatccaaaccagcgagtagacagcgacgacgctctgaatcacgacttcttc
tggtccgaccccatgccgtctgacctgaagaacatgctctccacacacaacacatccatg
ttcgagtacctggccccgcccaggagaagaagtcacatgccccagcagccagccaatcag
aacagaaaccccaccactacaagtcagacagagtttgatcgggtgttttga
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integrated database retrieval system
