Clupea harengus (Atlantic herring): 105911161
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Entry
105911161 CDS
T09045
Symbol
c2cd3
Name
(RefSeq) C2 domain-containing protein 3 isoform X1
KO
K16751
C2 domain-containing protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105911161 (c2cd3)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105911161 (c2cd3)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105911161 (c2cd3)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105911161 (c2cd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
105911161
NCBI-ProteinID:
XP_012695401
Ensembl:
ENSCHAG00000011441
UniProt:
A0A6P3WCS3
LinkDB
All DBs
Position
9:complement(5210420..5231524)
Genome browser
AA seq
2293 aa
AA seq
DB search
MKNKKIKSTKAGVNRKRVPSDVSTSTSLPPLVEGHLRCFLRVTVSRVLWTITKPPQNPQI
RIRWWGESCSGTLFRPRDGSLVAQKGIQSTARFPVRCGPKQFTSYLTDMGTLVLDVVTKP
DHLPVARAQITGLSRLSLSNSISGFFTVVSPTSEKMGELQVMLALEPLTESYDSSSSVPT
PDMSIDAAPKTLSDHNVLVVPSRPRSLSGKESLASSTAHTPRGVDHLYFQEKQSGLSSHV
HFRLEGEKPTGAPDGPLCSAQCPQSNDLLSALLERGSKLREAMVMSTLRTELDCDLALKD
TPLPLPKDNIRSTSLPPLLPSSGRLFHELLNLDLSPPQRPLSPTAPDVPECTADNEHRAV
ELLLGSINGSLLEAWDGEGSPPASLSAYSSLCLDSELNDPQYDESLLENLFYKAPICDSS
DHDGELEDGGKSPRNLGDKRERTKHNRTPEDQRFPEGRDLLAGLSLDRITTLGGVRLARV
TVHSLAVPADSPPTTPQKITGRGRPPRPLSTKRCSYSVEYVFPVSPSSQTALSELSRVVS
SKVTGGVVKFLQRIVFPVHFNGAALEKWWQTDLTFNIYSRKSTQKKPVLIGTAAFPLRSV
LESQDLGHTVSLPVHSTQGSAATVGPMKVSVLLAEDSQDFTTKKKPSADSKRTLSSDVVS
RKPLSPHRADPSSRPQSTAPGSERDPPAVQGRLSQRDTSPAPTVSFSQSVRPTNLTSSPP
RPGVRSSPRGPAEGVELAEEDEEVLLHALLMVPDGKDLSCGPSVHPPNVYLNCKLFGSDE
TARSVVSWGQTNPAFSFVQVAPVALTPRLLERMKNNMMVIEVWQKVGSQSQDQLLGLVKL
PLHQFYMSFRDNKITHLLLQAQYPVMAVDSHMPIVDVFSGSVRGSLRVLLAMGLAQQIVS
VQRTREEEMSPVAQVPRPSHLLDHLPQRDTKLSVGVAEALTEHVFVVRVEKVRGLAPLQS
TVWGEADCYVQYSFPTQEDESKQQADPDIIESSVTLKPFRSATTLCVPDPIFGHSETHVL
LAPPGVPVQKLLLSSLSSQGLRSGGGIQFDVWCRYYYPNVRDQHVAKGLLLLSKLCGMVT
MQRQQQQQTDGQLFSLPLIPRTEGNTTHQPPPSGFLDVSIQYKHRPFRSAGSRGGTGAGR
SVTMLVQIHRAAGLKAAARAVASVDPSLRYFADAGVNAYASLQLSFLSESERVCTRVVAA
TFCPEFSHQVEVPCSLLVQREGAVTHSLAELLQDAEAVLIVHNRDHRKGACASRSKEAVL
GTIRIPLADLIHKRTGISGWFGLSLPQGISPTQAPQCSVGGLELSLSFAHHSDRERVVKA
ARGIGWDLDDGDEDDGEDADDDHARARSVSVSVSVPRAWLPLRCLVLPGDSSLLRSTYCY
FRYKLYDRDSCYSDLRHPTLDKRPGAGEEDEEDYDEGQDEGVAMTTVAFEGCFTVGLRKS
QPLRWYLREERLEVQMWAAYGKGKGNRPCDTDCLVGSAFVDLSALARPSTQKQTISGVYP
LFRRSAADLSGAAIRVHITMTPGPAVAEYDSDPQGVLSPAEDEEGEQEEEWEALATVGTS
RQSRTYSRAGTKTAMSREPPTSPGPEAREEDTFQVTITVDRAMHLSLKGCPLSERSGGVP
GYCVSYATAGPAGTVSTDVVQNSSCPVWDHQQESLLSKQLLLDPQQSLVFKVWHKGDVER
VIGFATVDLSPLLSGFQAVCGWYNITDFSGQCQGQLKVAIAPLRGVHELRGQRQAPSVEA
AKDSSAVLSGLPLCYQTSGLYSSFPSHISRHTEQRINASPERLERLRPESRSSHQHEEHV
DNVRLFHQSLQEGQQRAPQPGTSAGDSDPSRSVLFSALRRNLSELDDIQRYFSSKLSTPT
FPTLSQREGGSSAPQQRQVEHSDSDADAQHLLLKSSRLVGEVNSIISGLSESHTHLSNLS
GLPPRPEREARPSVDQQAGSRVAPPSSEAPDSPPFSPRDCRTPEGDDPSLTSYDPTVTSK
LLVQAEEPQSDNRNSPSLEELQGCFSEEEIEEQNKPEEEKGEEDEEEEEEEEEDDDEEFE
ETLLEPRTLNDVTSLTDRTSPWTSLASDPDLCSLEGLEELEERPSRGLRRSSLEEEERGH
IRESSQMESLLAYTSIKPHGLQDSDSEASDAGGSDADDTLTETRRTPERLEQEECMSPTQ
HGDLSSGTEETTTPRGPGCPDAEGETSVMSASSECSTSPKQDSAADVDQRKEKLYDVMDI
PNFFLPTQHLEASMRALRLAPIFPLATSEPETSPTTGVPHRTRPKPKFTPSAANREETKR
IAKIFASRFKDEH
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaaaaataaaatctacaaaggctggagtcaacagaaagagagtacccagt
gatgtgtcaacctcaacaagcctcccaccgcttgtggagggccatttgcggtgttttctc
cgagtgaccgtgagcagggtcctgtggaccattactaaacccccgcagaaccctcagatc
aggataagatggtggggagagtcttgctctggaaccctgttccgtccgagggatgggtca
ttagtggcacagaagggtattcagtccactgcccgctttcctgtccgctgtgggccaaag
cagttcacatcctatttgacagatatgggcactctagttctggacgttgtgaccaaacct
gaccatctgcctgtggcacgagctcagatcactggactatcacgtctctctctgtccaac
tccatcagtggcttcttcacggtggtgtctcctacgtcggaaaaaatgggagagttacag
gtcatgcttgcgttggagcctcttactgaatcctatgacagcagcagctcagtccccacc
cctgacatgagtattgatgccgctcctaaaaccttgtctgaccataatgtgctggttgtg
ccatccagacctcgatctctctccggcaaggagtcattggctagcagtactgctcataca
ccacgaggagtggatcacctgtacttccaggagaagcagagtggcctgtcgagtcacgtt
catttcagactggagggagagaaacctacaggagccccagatggtcccctttgctctgct
cagtgcccacaatcaaatgacctcctatcagctttgcttgagcgtggcagcaaactgcga
gaagccatggtcatgtcgacactgaggactgagctggactgtgacctagctctgaaggac
acaccactacccctgccgaaagacaacatcagatctacctctttaccgccacttctccct
tcatctgggaggttatttcatgagctcctgaaccttgacctcagcccgccacagcgccca
ctcagtcccaccgcacctgacgtaccagaatgcacagcagacaatgagcacagagctgtg
gagctgctgctgggcagtataaatggctcgctgctggaggcttgggatggagagggctcc
cctcctgcctctctgtccgcttacagcagtttgtgtttggacagcgagctcaacgacccg
cagtatgatgagagcctgctggagaacctgttctacaaagctccgatatgtgactcgagt
gaccatgatggagaactggaggacggtgggaagtcccctcgtaacctgggagacaagaga
gaacgcaccaaacacaacagaaccccagaggaccagcgatttccagagggcagggatctg
ctggcggggctgagcctggatcggatcaccactctggggggagtccgtctagcgagggtc
accgttcactccctggctgtcccggcagacagccctcccaccacccctcagaagataacg
ggcagagggaggccacccagaccactctccaccaagagatgctcctactctgtggagtat
gtgttccccgtgtcgcccagcagtcagactgccttgtcagagctctctcgagtggtctcc
agcaaagtcactggaggagtggtgaagtttctgcagcgcattgtatttcctgtccacttc
aatggagctgctttagagaagtggtggcagacagacctcactttcaacatatactccagg
aagagtactcagaagaagcctgttctcattggcacagctgccttcccactgcgctctgtg
ctggagagccaggacctcggccatactgtttcactgcctgttcacagcactcagggatct
gctgccacagttggccccatgaaggtgtcagtcctgctggctgaggacagtcaggatttc
acaaccaagaagaagccctcagcagattccaaacgcactctcagctcagacgtcgtctcg
cgtaaacccctcagtccccatcgggctgacccctcctccagaccccagtccaccgcccca
ggctctgagcgggaccccccagcggtgcagggcaggctgtcgcagagggataccagccca
gcgccgactgtctccttcagccagagcgttcggccaaccaatctcacgagcagcccacct
cgcccgggcgtaaggagttccccacgagggcctgcggagggggtggagctggcagaggag
gacgaggaggtgctgcttcacgccttactcatggtgcctgatgggaaggacctgagctgc
gggccgtctgtgcatccgcccaatgtttacctcaactgcaagctgttcggctcggacgag
actgcgagatcggtggtcagctggggccaaaccaaccccgccttcagcttcgtacaggtg
gctcccgtggctttaaccccgcgcctgctggagcggatgaagaataacatgatggtgatt
gaggtgtggcaaaaggttggcagccagagtcaggaccagctgctggggctggtcaaactc
ccactgcaccagttctacatgtccttcagggataacaaaatcacgcaccttctccttcaa
gcccagtatcctgtgatggcggtggacagccacatgcccatcgtagacgtgttttcaggc
agtgtgcggggcagcctcagggtccttctggccatgggcttggcacagcagattgtgtca
gtgcagaggacgagggaggaagaaatgtccccggttgcccaggtcccacgacccagccat
ttattggaccacttgcctcaaagagacacaaagctgagtgtgggtgtggctgaggcgctg
acggagcacgtgttcgtggtgcgggtggagaaggtgagaggcctggcccccctgcagtcc
accgtgtggggagaggcagactgctacgtccagtactccttccccacccaggaggatgag
tccaagcaacaagctgatcccgacatcatagagagcagtgtgaccctaaagccgttccgc
tcggccaccacgctatgtgtgcctgaccccatatttggccacagtgagacccacgtgttg
ctggcgccacccggggtgcccgtccagaaactcctcctcagctccctctccagccagggc
ctccgcagtggagggggaatccagttcgacgtgtggtgcaggtactactacccaaacgtg
cgtgaccagcacgtggccaaggggctgctgctgctgtctaagctgtgtgggatggtcacc
atgcagaggcaacagcagcagcagacagacggacagctcttctctctgccactcataccc
aggacagagggcaacaccactcatcagcctccaccctcagggttcctggacgtgagcatt
cagtacaagcatcgaccattcagaagtgccgggtcgagaggcgggacgggggccgggcga
tccgtcactatgctggtgcagatacacagagctgcaggattgaaagctgcggcacgtgct
gtggcctctgttgacccttcgctgcgttactttgccgacgccggtgtgaacgcgtacgcg
agcctccagctgtccttcctgtctgagagcgagcgtgtgtgcacccgtgtggtggcggcc
accttctgccctgagttcagccaccaggtggaggtgccctgcagcctgctggtccagagg
gagggggccgtcacgcacagcctggccgagctgctgcaggatgccgaggccgtcctcatc
gttcacaaccgggaccaccgcaagggagcttgtgcctcgaggtctaaagaggcagtgttg
ggaactataaggatccccctggcagatctcattcacaaacggacagggatatctggctgg
tttggtctctcgctgccccagggcataagccctactcaggctccccagtgctctgtggga
ggcctggagctctccctcagcttcgcacaccactctgaccgcgagcgcgtggtcaaggcc
gcccgtggcatcggctgggatctggacgacggagatgaagacgatggtgaagatgctgat
gatgaccacgccagagcgaggagtgtgtccgtgtccgtgtccgtgccccgcgcttggctc
cccctgcgttgcctcgtcctccctggcgactcctcgctcctgcgctctacctactgctac
ttcaggtacaagctctatgaccgtgactcctgctactccgacctccgccacccgaccctg
gacaagagaccaggagccggggaggaagatgaggaggactatgacgaggggcaagatgaa
ggggtagccatgacgacggtggcgttcgagggctgcttcacggtggggttgaggaagagt
cagccactgcggtggtacctgcgggaggagaggctggaggttcagatgtgggctgcctat
gggaagggcaagggcaaccggccctgcgacacggactgcctggtgggatcagccttcgta
gacctctcagcgctggccaggccgtccacacagaagcagaccatcagtggtgtgtacccc
ctcttcagacgctctgcagccgacctcagcggcgccgccatcagggtccacatcaccatg
acgcccggccccgcggtggcagagtacgacagcgatcctcagggggtgctgtcccccgct
gaggatgaggagggggagcaggaggaagagtgggaggctctggcgacggtgggcacctcg
cggcagtcacgcacatacagccgtgccggcacaaagacggccatgagcagggagcccccg
acgtcacccggcccggaggccagagaggaggacaccttccaagtcaccatcacagtggac
cgcgctatgcacctcagcctgaagggatgcccgctctctgagcggagcggaggggtgcca
ggctactgcgtgtcctacgccacggccggccctgcgggcaccgtctccactgacgtggtg
cagaacagcagctgcccagtgtgggatcaccagcaggagtctctgctttccaaacagctg
ctgctggatcctcagcaatctctggtgttcaaagtctggcataaaggagacgtggagcgc
gtgatcggctttgccacggtggacctgtctcccctgctgtcggggttccaggcagtttgc
ggctggtataatatcacagacttcagcgggcagtgccagggccagctcaaggtggccatc
gccccgctgaggggcgtgcatgagctccgggggcagaggcaggccccgtcagtagaggcc
gccaaagactccagcgctgtgttgagcggtctcccgctgtgctaccagacgtcgggcctc
tacagctccttccccagccacatcagccgccacacggagcagcgcatcaacgcctcccct
gagcgcctggagcgcctccggcctgagagcagatccagccaccagcacgaggagcacgtg
gacaatgtgcgtctgttccaccagagcctgcaggaggggcagcagcgagcgccacagcct
ggcacctccgccggagactccgaccccagccgctccgtcctcttctcagcactcaggagg
aacctgagcgagctggacgacatccagcgttacttcagcagtaagctctccacacccacc
ttccccacactgagccagcgggaggggggtagcagcgccccccagcagcgccaggtggag
cactcggactcggacgcagacgcccagcacctcctgctcaagtccagccgcctggtgggg
gaggtgaacagcatcatcagcggtctgagtgaatctcacacgcatttgtcaaacctctct
ggcctgcccccacgccctgagcgagaagcccgtccatctgtagaccagcaggctggatcc
agggtggcgcctccatcttctgaagccccagactctcccccgttctccccgagagactgt
agaacacctgagggtgatgacccctcgctgacctcgtacgaccccactgtgacgagcaaa
cttcttgtacaagcggaggagcctcagagtgacaacagaaattctccctctcttgaggag
ctccaagggtgcttctctgaagaagagatagaggagcaaaacaagcctgaggaggaaaag
ggagaggaggatgaagaggaggaggaggaggaggaggaggacgacgacgaggagtttgag
gagaccctgttagagccccgtaccctgaatgatgtcacttccttgacggaccgaaccagc
ccctggacgagcctggcgtccgacccagatctgtgttccctggaagggctggaggagctg
gaagagcggccatcgaggggcctaaggaggtcaagtctggaggaggaggagagggggcac
ataagagagtcctcacagatggagagcctcctggcgtacacgtccattaaaccacacggg
cttcaggactcagactccgaagcctcagatgcagggggttctgatgcagacgacacattg
actgagactagaagaactccagagagactagagcaggaggaatgcatgtccccaactcag
catggagatttgtcatcaggcactgaagagacgactactcccaggggtcctggctgccca
gacgcggagggggagacctcagtgatgtcagccagcagtgaatgcagcacgagcccaaaa
caagattctgctgctgacgtcgaccaacggaaagaaaaactctatgatgtgatggacatt
ccaaacttcttccttcccactcagcatctagaggcttccatgagagccctacgcctggcc
cccatcttccctctggccacctcagaaccagagacatctcccactactggagttccacat
cgcactcgtccgaaaccaaagttcacgccctcagcagccaacagagaggagaccaagaga
atagcaaagatatttgcatctcgtttcaaggatgaacattag
DBGET
integrated database retrieval system
