KEGG   Clupea harengus (Atlantic herring): 105911176
Entry
105911176         CDS       T09045                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03082  ATP-dependent chromatin remodeling
char03083  Polycomb repressive complex
char04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105911176 (rbbp4)
   03083 Polycomb repressive complex
    105911176 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    105911176 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105911176 (rbbp4)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     105911176 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     105911176 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     105911176 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     105911176 (rbbp4)
    PRC2.2
     105911176 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     105911176 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105911176 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    105911176 (rbbp4)
   NuRF complex
    105911176 (rbbp4)
   NuRF complex (fruit fly)
    105911176 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 105911176
NCBI-ProteinID: XP_031441866
Ensembl: ENSCHAG00000006007
UniProt: A0A6P8GVA6
LinkDB
Position
19:1253222..1264304
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECCPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADA
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggacaaagaagctgcatttgacgatgccgtggaggagcgggtcatcaacgaggag
tacaagatctggaagaaaaacactccgttcctctacgacctggtgatgacccacgcgctg
gagtggcccagtctgactgcacagtggctcccagacgtcacacgacccgaggggaaggac
tacagcgtgcaccggctggtcctcggtacacacacctcggatgaacagaaccacctggtc
atcgccagcgtccagctgcccaatgatgatgcccagtttgatgcgtcgcactacgacagc
gagaaaggagagtttggtggcttcggctccgtgagcggtaagattgagatcgagatcaag
atcaaccacgagggcgaggtcaaccgggcgcgctacatgcctcagaacccctgcatcatc
gccaccaagacccccaccagcgacgtgctcgtcttcgactacaccaaacacccctccaaa
cccgacccctctggagagtgctgtcctgacctgcgtctgcggggtcatcagaaggagggg
tacggcctctcctggaaccccaacctgagtggctgcctgctcagcgcctctgacgaccat
actatctgcctgtgggacatcagcacggtgcctaaggaggggaaggtggtggacgctaag
accatcttcaccggacacacggctgtggtggaggacgtctcctggcacctgctgcacgag
tccctcttcggatcagtcgctgacgaccagaaactcatgatctgggacacgcggtccaac
aacacgtccaagcccagtcatgcggtggacgcccacacggccgaggtcaactgcctgtcc
ttcaacccctacagcgagttcatcctggccacaggctccgccgacaagacggtggcgctg
tgggatctgcgtaatctaaagctgaagctgcactcctttgagtcgcacaaggacgagatc
ttccaggtccagtggtcgccccataacgagaccatcctggcctccagcggcaccgacagg
agactcaacgtgtgggacctcagtaaaattggagaggagcagtcgccagaagatgctgag
gatggacctcctgagctgctgttcatccatggcggccacacggccaagatctcggacttc
tcctggaaccccaacgagccatgggtcatctgctctgtgtccgaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaacgacgaggatccagagggtgccgccgacgcc
gaggtccagggttga

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