Clupea harengus (Atlantic herring): 105911183
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Entry
105911183 CDS
T09045
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105911183
04081 Hormone signaling
105911183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105911183
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105911183
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105911183
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
105911183
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
105911183
NCBI-ProteinID:
XP_031442259
Ensembl:
ENSCHAG00000003500
UniProt:
A0A6P8GWE4
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Position
19:complement(6345141..6477290)
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AA seq
415 aa
AA seq
DB search
MSEQADKCSPGWKHEALQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEDN
RERRRREELQKTVWDRPEPTPEEWELIRVVTEAHMATNAQGNHWKTKRKFLVEEAMLLNE
ITCNLFYTSDQNAVGVKDSKPEDIGQAPVLSATEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVDRIERCQEGFLQAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaagcagacaagtgcagcccgggctggaaacacgaggccttgcagaatggg
tacataccaagttacctggacaaggacgagctgtgtgtagtgtgtggggacaaggccaca
ggctaccactaccgctgcatcacctgtgaaggctgcaaggggttcttccggcggaccatc
cagaagaacctgaaccccacatacgcctgtaagtacgaggccaagtgtgtcatcgacaag
gtcacccgcaaccagtgccaggaatgccgcttcaagaagtgcattgccgttggcatggca
acggacttggttctggacgacagcaagcgtctggcgaagcggaagctgattgaggacaac
cgtgagcgtcggcgacgcgaggagctgcagaagacggtgtgggaccggcccgagcccacc
cccgaggagtgggagctcatccgtgtagtcacagaggcgcacatggcaaccaacgcccag
ggcaaccactggaagacgaagagaaagttcctggtggaagaagctatgctacttaatgaa
ataacatgtaatttattctatacttccgaccagaatgcagtgggggtgaaagactctaag
cccgaagacattggccaagcgccggtgctgagtgccacggagggaagcaaagtggacata
gaggccttcagccagtttacaaaaataatcacccccgccatcacgcgcgttgtggacttt
gccaaaaagctgcctatgttctgtgagctgccttgtgaggaccagattatcctgctgaaa
ggctgctgtatggagatcatgtctctgcgggcggccgtgcgctacgaccccgagagcgag
acgctaacgctgaacggcgaaatggcggtgacccgcggacagctcaagaacggcggcctg
ggcgtggtctctgacgccatctttgacctgggtgtgtccctctcctctttcaacctggac
gactcggaagtggctctcctgcaggccgtcatcctcctctcctccgatcgtccaggcctg
acgagtgtggaccgcattgagcgttgccaggagggcttcctgcaggcctttgagcactac
atcaactaccgcaagcacaaggtggcgcacttctggcccaagctgctgatgaaggtgacg
gacctgcgcatgatcggggcctgccacgccagccgcttcctgcacatgaaggtggagtgt
cccaacgagctcttccccccgctcttcctggaggtgttcgaggactga
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