KEGG   Clupea harengus (Atlantic herring): 105911292
Entry
105911292         CDS       T09045                                 
Symbol
tmtops3a
Name
(RefSeq) teleost multiple tissue opsin 3a
  KO
K04256  c-opsin
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:char01009]
    105911292 (tmtops3a)
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:char04030]
    105911292 (tmtops3a)
Protein phosphatases and associated proteins [BR:char01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105911292 (tmtops3a)
G protein-coupled receptors [BR:char04030]
 Rhodopsin family
  Vision
   Opsin
    105911292 (tmtops3a)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srw 7TM_GPCR_Srx DUF2975
Other DBs
NCBI-GeneID: 105911292
NCBI-ProteinID: XP_012695542
Ensembl: ENSCHAG00000014027
UniProt: A0A6P3WCX7
LinkDB
Position
20:4429188..4437420
AA seq 325 aa
MLVHIWSLNLSILESFSVNQSYNDSTEDPLFPHRLSRTGHTVVAIFLGIILFFGFFNNLL
VLLVFAKFRCLWTPINLILLNISVSDILVCIFGTPFSFAANVYGRWLIGDLGCQWYGFAN
SLFGIVSLVSMSILSYERYTTLLCPTKADLSDFRKAWLWVAGSWLYSLMWTLPPLLGWSH
YGPEGPGTSCSVEWRRRSVGGMSYVVCLFVFCLALPLLLMLLCYIRILQFIREMSRVKYK
AAQRRQNHILRMVIIMVSCYLLCWMPYGLMALVATFGETGLVTSVMSVVPAVLAKSSTVL
NPIIYVLFNDQVGPPFHSAIQISPC
NT seq 978 nt   +upstreamnt  +downstreamnt
atgttagttcacatttggagtttaaatttgagcattttggagagtttcagtgtaaaccaa
agctataatgatagcactgaggatcctcttttcccacatcgtctgagtaggaccggccac
accgtagtagcaattttcctcggaattatcctgtttttcggattctttaacaatcttctc
gttctgttggtattcgcaaagtttcgttgtctctggacacccatcaacctcatcctgctg
aacatcagcgtcagtgacatacttgtgtgcatttttggcacgccattcagttttgctgcg
aatgtctacgggaggtggctcatcggggacctaggttgccagtggtatggtttcgccaat
tcgcttttcggcatcgtgtccctggtgtccatgtccatcttgtcttacgagcgctacacg
acattgctgtgccccaccaaggctgacctgtcggacttccgtaaagcctggctgtgggtg
gctggctcctggctgtactcactgatgtggacgctgcctcccctcctcggctggagccac
tacgggccggaggggccgggcacctcctgctccgtggagtggcgtcggcgctcggtgggc
ggcatgtcgtacgtggtgtgcctcttcgtcttctgcctggcgctgcccctgctgctcatg
ctgctgtgctacatcaggatccttcagttcatcagggagatgagtcgggtgaagtacaaa
gcggctcaacggcggcaaaaccacattctgcggatggtcatcatcatggtgtcctgctat
ctgctgtgctggatgccctacggcctcatggccctggtggccaccttcggagagacgggt
ctggtcacgtctgtgatgagcgtggtgcctgctgtcctggccaagagcagcaccgtctta
aaccccatcatctatgtgctcttcaatgaccaggttggcccgcctttccattcagccatt
cagatcagtccttgctag

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