Clupea harengus (Atlantic herring): 105911295
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Entry
105911295 CDS
T09045
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03020
RNA polymerase
char04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105911295 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
105911295 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105911295 (polr3b)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105911295 (polr3b)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105911295 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
105911295
NCBI-ProteinID:
XP_031420191
Ensembl:
ENSCHAG00000006626
UniProt:
A0A6P8F864
LinkDB
All DBs
Position
3:5152448..5175544
Genome browser
AA seq
1133 aa
AA seq
DB search
MDVLHDEFGDMSHQQLAAPVDTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLREMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIGIIF
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGNNNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNTELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVF
LNGNILGVIREHLKLVNTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
NGQPAVKNRHIEELSQGYRNFDDFLHESLVEYLDVNEENDCSIALYEHMIVKTTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMV
KTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAETRKPIWRHSNLDADGICSPGEKVENKQVLVNKYMPTVTQTPL
EGTAQPGQPQYRDVPITYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGKFHY
GTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYYGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLSRYND
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgttctacacgacgagttcggggacatgtcccatcaacaacttgcggcgcctgta
gatactgtggaggaaaaatggaaactgctcccagcgtttttgaaggtcaaaggactcgtg
aagcaacacatagactccttcaattacttcatcaatgtggagataaagaagatcatgaaa
gctaatgaaaagatcactagtgatgctgacccaatgtggtaccttaaatacctcaatatc
tatgtcggcatgccggatgtggaggagagcttcaatgtaacacgaccagtgtctcctcat
gagtgtcgcctgagagaaatgacatactctgcaccaatcacagtggacattgagtacacc
cgagggagtcagagaatcatccgaaatgccctgcctattggaagaatgccgattatgctg
cggagttccaactgcgttcttacaggaaagacgcccatggagttctccaaactaaatgag
tgtcccctggacccaggtggctactttattgtcaaaggccaagagaaggtcattctgatc
caggaacagctttccaagaacagaatcattgtggaacaggacaggaagggagcagttgga
gcttctgtgaccagctctacccatgaaaagaagagtaggaccaacatgattgtaaaacag
ggccgcttttacctgaagcacaacacgctgtcagaggatgcacccattggcatcatcttc
aaggcgatgggcgtggagagtgaccaggagattgtgcagatgatcggcacggaggagcat
gtgatggctgccttcgcccccagtctggaggagtgtcagaaggcccagatcttcacccag
acgcaggccctgaagtacatcgggaacaaggtgcggcgacagcggatgtgggggggaccc
aagaagaccaagatggaggaggctagagagctgctggcctcaaccatcctcacccacgtg
cctgtgaaagagtttaacttccgtgcgaagtgtatttatctagctgttatggtgcggagg
gtcatccttgcccaggggaacaacaacaaagtcgacgaccgagattactatggtaacaag
cgtctggagttggctggccagctgctgtccctgctgtttgaggatttgtttaagaagttc
aacacggaactgaagaagatcgccgaccagatcatccccaagcagcgagcggctcagttt
gacgtggtcaagcacatgagacaggaccagatcaccaacggcatggtcaacgccatctcc
acaggtaactggtctctgaagagatttaagatggacaggcagggcgtgacgcaggtgctg
tctcgcctctccttcatctccgcgctgggcatgatgacgcgcatctcctcccagttcgag
aagacgcgcaaggtcagcgggccgcgctcgctgcagccgtcccagtggggcatgctgtgc
ccctccgacacccctgagggggaggcttgtgggctcgtgaagaacttggccttgatgacg
cacatcaccacagacatggaggacgggcccatcgtcaagctggccttcaacctgggtgtg
gaggacgtcaacctgctctgtggagaggagctgtcctaccccagcgtctttctggtcttt
ctcaacggtaatatcctgggtgtgatccgggagcacctcaagctggtgaacaccttccgg
ctgatgcggagagcaggcttcatcaacgagtttgtgtccatttccaccaacctgacagac
cgctgcgtctacatctcctcagacggggggagactgtgcagaccctacatcatagtgaag
aacgggcagccggccgtcaagaacagacacatagaggagctgtctcagggttacaggaac
tttgatgacttcctgcacgagagcttagtggagtatctggacgtgaacgaggagaatgac
tgcagcatcgctctttatgagcacatgatcgtcaaaaccaccacacatctggagattgag
ccgttcactttgctgggtgtgtgtgctggcctcatcccatacccccatcacaaccagtcc
cctaggaacacctatcagtgtgctatgggcaagcaggccatgggcaccatcggctacaac
cagaggaaccgcatcgacacgctcatgtacctgctgggctaccctcagaagcccatggtg
aagaccaagaccatcgagctgatcgacttcgaaaagctcccggcgggccagaacgccacg
gtggcagtcatgagctacagcggctacgacatagaggacgcgctggtgctcaacaaggcc
tctctggaccgagggttcgggcggtgcctggtctacaagaatgccaagtgcactctgaag
cgctacactaaccagacgtttgacaaggtcatgggtcccatgctggacgcagaaacacgc
aagcccatttggaggcacagcaacctggatgctgatggcatctgctcccctggtgagaag
gtggagaataaacaggtgctggtgaataagtacatgcccaccgtcacccagacgccactg
gagggcactgcccagcctggccaaccgcagtacagagatgtgccaatcacctataagggc
tccacagactcatacattgagaaagtgatgatctcctccaacgcggaggacgccttcctc
atcaagatcctgctgcggcagaccagacggcccgagatcggagacaagttcagcagccgg
cacggccagaaaggagtgtgtggcctgattgtccctcaagaggacatgcccttctgtgac
acgggcatctgcccggacatcatcatgaacccacacggctatccctcgcgtatgacggtg
gggaagctgattgagctgctggcagggaaggcaggtgtgctggacggcaagttccactac
ggcacagccttcgggggcagcaaggtcaaggacgtgtgtgaggacctcatccgctacggc
tacaactaccagggcaaggactacgtcacctccgggatcactggagagccactggaggcg
tatatctactatggccccgtgtactaccagaagctgaagcacatggtgctggataagatg
catgccagggcccgcggacccagggctgtgctcaccaggcagcccacagagggtcgctcc
agagacggaggcctgcgattgggtgagatggagagggactgtctgattggctacggtgcc
agcatgttgctgctggagcggctcatgatctccagcgatgccttcgaagtggacgtgtgt
ggacagtgtggcctgctagggtactcaggctggtgccactactgcaagtcctcctgccac
gtgtcctccctacgcatcccctacgcctgcaaactgctgttccaggaactgcagtccatg
aacattgtgccacgccttaaactgtcccgctacaacgactga
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