Clupea harengus (Atlantic herring): 105911364
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Entry
105911364 CDS
T09045
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105911364 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105911364 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
105911364 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105911364 (cacna2d4a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105911364 (cacna2d4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA_2
VWA
dCache_1
VWA_CoxE
CobT_C
Motif
Other DBs
NCBI-GeneID:
105911364
NCBI-ProteinID:
XP_031438770
UniProt:
A0A6P8GVH1
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Position
16:complement(26047761..26131774)
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AA seq
1067 aa
AA seq
DB search
MLLLGCGCVPGSGRLGCGGRERRERRGLSRTGRAMAVWIFFSAYLCFSAHAQMRIPPETV
LDWANTFGRQLVSMSTKYSGALLLQKKYRDIEPIVKMEEVEGSELVQSFAEEMEKMLGRK
MKSVKRLTEAAEDADLYHEYNATLEFDYYNSMLINSADDEGNFMELGGEFALEENEHFNK
LPVNTQQSDIQVPTNVYNKDPDIVNGVYMSEALNDIFISNFEKDPTLTWQYFGSSTGFFR
LYPGIKWTPDENGVVTFDARNRNWYIQAATSPKDIIIVVDVSGSMKGLRLTIAKHTINTI
LDTLGENDFVNVIAYSDYVRYVEPCFRGTLVQADLDNREHFKLLVEGLHVKGEGKVKKAM
KEAFRILNVAATLQVGSLCNQAIMLITDGAMEDFQQVFEEFNWPERRVRVFSYLIGRELT
FADNVKWIACNNKGYYTHISTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLP
NTAELFSTQAQSLLLMTSVAMPVFSKKEETLSHGILLGVVGTDVPLRELMRLAPRYKLGV
HGYAFLNTNNGYIMSHPDLRPLYKDGKKLKPKPNYNSVDLNEVEWEDTEEILRTAMVKGE
TGSLSLDVRATVEKGRRVLFLKNDYFYTAIKDTPFSLGMVLTRGHGEFIFLGNVSVEEGL
HDLTAYDVSIADEWTYCETDIDPHHRKYTQLQAVIRYLTGKEPELECDEDLMRQTLFDAV
VTAPMEAYWTAIMLNVSGIDEGVETAFLGTRSGLMRLIRFVGNEKRVGKKFLSAADKENI
FTLDHFPLWYRRAAEYPDGKFLYYLPKEDTRDVFRDYESDSSASLSPEDLELEYEDEDDE
RIVIATTSVTVTVDKKKAIAGALGIQMTLDMMEKKFFSVTTQQPNDTDCSAVEGLCPLSC
SLPEINCYVTDSNGFVMISQDRNDVGRFFGEVDGSVMATLLRMGMFKRVSLFDYQAMCKT
GSHSASSARPLLSPFYGVLGVLKWFLSNFLLFLMDFSFCGLWHSDQFVDAGTFHASNKKK
SGTSYSRVILSIPVLSTSRQSRRRTASSNVDVVRRCLSSSRSLTVTC
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgggatgcggctgcgtgccgggcagtggtagactgggatgtgggggccgg
gaacgccgggaacgccgggggttgagccggacggggagagcgatggccgtgtggatcttc
ttctcagcgtacctgtgcttcagtgcccacgctcagatgaggatcccaccagagacggtc
ctggactgggccaacacgtttggtcgtcagcttgtttccatgtcaaccaaatactctggg
gccctcctcctgcagaagaagtatagggacatcgagcccattgtgaagatggaggaggtg
gaggggtcagagctggtgcagtcgttcgctgaggagatggagaagatgctggggaggaag
atgaagtctgtgaagagattgactgaggctgctgaagacgctgacctgtaccatgaatac
aacgccactttggagtttgactactacaactccatgctgatcaactcggcggatgacgag
ggcaacttcatggagctggggggggagtttgccctggaggagaacgaacacttcaacaaa
ctgcctgtcaacacacaacagagcgacatacaggtgccaaccaacgtctacaacaaggac
cctgatatcgtgaacggtgtgtacatgtccgaggccctgaatgacatcttcatcagcaac
tttgagaaggaccccacgctcacctggcagtacttcggcagttccacaggattcttcagg
ctttaccctggaattaagtggactccagatgagaatggggttgtgacgtttgatgctagg
aatcgtaactggtacatccaggctgccacctcccctaaggacatcatcatcgtggtggac
gtcagcggcagcatgaagggcctccgtctgaccatcgccaaacacaccatcaacaccatc
ctggacacactcggcgagaacgacttcgtcaacgtcatcgcctacagtgactatgtgcgc
tacgtggagccctgtttcagaggcacgctggtgcaggccgacctggacaacagagagcac
ttcaagctgctggttgaggggttgcatgtgaaaggagagggcaaagtcaagaaggccatg
aaggaagcattccgtatcctcaacgtggcggctacgttgcaggtgggtagtctgtgtaat
caggccatcatgctcatcacagacggggccatggaggactttcagcaggtgtttgaggag
ttcaactggccagagcgcagggtgcgggtcttcagttacctgattggacgagagcttacc
tttgctgataatgtcaagtggattgcctgcaacaacaaaggttactacacacacatctcc
accctggctgacgtgcaggagaatgtgatggagtacctccacgtcctcagccgaccaatg
gttatcaaccacgaccatgacatcatctggactgaagcctacatggacagtgtgctcccc
aacactgctgagctcttcagcactcaagcccagagtctgctgctgatgacatcagtggcc
atgcctgtgttcagcaagaaagaggagacgctctcccacggcatcctgctgggggtggtg
gggacggacgtacctctcagggagctgatgaggctggcgcccagatacaagctgggggtt
catggctatgcgttcctcaacactaacaacggctacatcatgtctcaccctgatctcaga
ccgctgtataaggacggaaagaaactgaaacccaaaccaaactacaacagcgtggacctg
aatgaggtggaatgggaggacacagaggagatattgagaactgctatggtgaaaggggaa
acaggaagtctatcgttggatgtcagagccactgtggagaaggggagacgtgtgctgttt
ctgaagaatgactacttctacaccgccattaaggacactccattcagtttgggaatggtg
ctgactcgtggccatggggagttcatcttcctggggaatgtctctgtggaggaaggtctg
catgatctcacagcctatgatgtgtccatagccgatgaatggacatactgtgagacagac
attgacccacaccaccgcaagtacacacagctgcaggccgtcatccgctacctcacagga
aaggaaccagagctggagtgtgatgaggacctgatgcgtcagacgctgttcgatgccgtg
gtaaccgctcccatggaggcctactggactgccatcatgctcaacgtctctggtattgat
gagggcgttgagacggccttcctgggaacgcgctcgggactcatgcgcctcatcagattc
gtcggcaacgagaaacgtgttggaaagaagttcttgtctgcggcggataaggagaacatc
ttcaccctggaccacttccccctctggtaccgacgcgccgcggagtaccccgacggaaag
ttcctctactacctgcccaaggaggacaccagagatgttttcagggattatgagtccgac
tctagcgcctccctcagtccggaggaccttgagctggagtacgaggatgaggatgacgag
aggattgtgatcgccaccacgtccgtgacggtgaccgtggacaagaagaaggccatcgct
ggagcccttggtattcagatgaccctggacatgatggagaaaaagtttttttctgtaacc
acacagcagcccaacgacacggattgttctgctgttgaaggcctgtgtccactcagctgc
agtctgcctgagataaattgctatgtgaccgacagcaatggcttcgtgatgatctcccag
gaccgaaatgacgtggggcgcttcttcggggaggtcgatggctcagtcatggcaacactt
ctccggatgggcatgttcaaacgggtatcgctgtttgactaccaggccatgtgcaagaca
ggatcccactctgccagcagtgctcggcctctgctcagccccttctatggtgtgttgggg
gtgctgaagtggttcctctccaacttcctgctgttcctaatggactttagtttctgtggc
ctttggcactcagatcagtttgtggacgccggaacgttccatgcatcaaataagaagaag
tctgggacatcctacagccgtgtgatactgagtatcccagttttgtctacgagccgtcaa
tcaaggagacgaacagcgtcatcaaatgtggacgttgtcagaaggtgtttgtcatccagc
agatccctgacagtaacctgctga
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