Clupea harengus (Atlantic herring): 105911377
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Entry
105911377 CDS
T09045
Symbol
rbpjb
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region b isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105911377 (rbpjb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105911377 (rbpjb)
Transcription factors [BR:
char03000
]
Eukaryotic type
Other transcription factors
Others
105911377 (rbpjb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
105911377
NCBI-ProteinID:
XP_031441421
Ensembl:
ENSCHAG00000001502
LinkDB
All DBs
Position
18
Genome browser
AA seq
565 aa
AA seq
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MYCAWGGGDGRFWQSCCVHSDPPPPAPCTPTAFYQITRVLLSSVHESSRVCSQIERGSKR
EGREKSRKFGEHPQPQRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKEQMEREGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSRRIKVISKPSKKKQSLKNADREFVCIASGTKVALF
NRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKL
VCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQA
TPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAM
LELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVR
NDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRSGDNSRLLSGASTPNSMGPGGPISGGPD
TGPYGSGTSGGVPSSASSAAAAVVS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtgcatgggggggcggagatgggcggttttggcagagttgttgtgtacactct
gacccaccacctccagccccctgcacccccacagccttctaccaaatcaccagggtcctt
ctctccagtgtccatgagtcatctcgcgtctgcagccaaattgagagggggagcaagcga
gaggggagggaaaaaagcaggaagtttggggagcaccctcaaccgcagcgcctgacaaga
gaagcgatgcggaactacctgaaggagagaggggaccagactgtcctgatcctgcacgcc
aaagtggcccagaagtcctacggaaatgagaagaggttcttctgccctcctccgtgtgtg
tacctcatgggcagcggctggaagaaaaagaaggagcagatggagcgggagggctgttcg
gagcaggagtcccagccctgcgccttcatcggcatcgggaacagcgaccaggagatgcaa
cagctcaaccttgagggaaagaactattgcacagccaaaacgttgtacatatccgactca
gacaagagaaagcacttcatgctgtcggtcaagatgttctacggcaacagcgccgacatc
ggcgtcttcctcagcaggaggatcaaagtcatctccaaaccctccaaaaagaagcagtcc
ctcaagaatgcagaccgtgagttcgtgtgtatagcatcgggcactaaggtggcgttgttt
aacaggctgaggtctcagacagtcagcacgcgctacctccacgtggaggggggcaacttc
cacgccagctcacagcagtggggggccttctacatccacctcctggatgatgaggagtcc
gaaggggaggagtttacagtgcgggacggttacatccactacggccagacagtcaaactc
gtgtgctcggtcacaggaatggcactgccacgactgatcatccgtaaggtggataagcag
acagccctgcttgatgcggacgaccccgtctcacagctccacaagtgtgccttctacctg
aaggacacggagcgcatgtacctgtgcctgtcccaagagaggatcatccaattccaagcc
actccatgcccaaaggaaccaaacaaggagatgatcaacgacggcgcctcctggacaatc
atcagcacggacaaggcggagtacaccttctacgagggcatgggtcctgtccactcaccg
gtcacacctgtgcctgtggtggagagcttacagctcaacggtggtggtgatgtggccatg
ctcgagctcactggtcagaatttcactccaaacctgagggtgtggttcggtgatgtggag
gcagagaccatgtacaggtgtgcggagagcatgctgtgcgtggtgcccgacatctccgcc
ttccgggagggctggcgctgggtgcggcagccggtgcaggtgcccgtgacgctggtgcgc
aacgacggcatcatctactccacctcgctcacattcacttacacgcccgagccgggcccc
cgaccgcactgcagtgccgccggggccatcctgaggtctggcgacaacagcagactgctc
tccggggccagcacacccaacagcatgggccctggggggcccatcagcggagggcccgac
acggggccctacggatccggaaccagtggaggggtaccatcgtccgcgtcatctgcggcg
gcggccgtggtctcctaa
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