Clupea harengus (Atlantic herring): 105911468
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Entry
105911468 CDS
T09045
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04518
Integrin signaling
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
105911468 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105911468 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105911468 (arhgef6)
Membrane trafficking [BR:
char04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105911468 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
RhoGEF67_u1
PH
SOS1_NGEF_PH
SpoVR
Mis12
CENP-Q
Motif
Other DBs
NCBI-GeneID:
105911468
NCBI-ProteinID:
XP_031442624
Ensembl:
ENSCHAG00000014110
UniProt:
A0A6P8GTY9
LinkDB
All DBs
Position
20
Genome browser
AA seq
842 aa
AA seq
DB search
MSVACSSGSEPATRLGERKRKKKQKCHGCALHPNRVRRSRCLSGCCVLKSERPVKTMNPE
EQVVTWLISLGVLNSPKKNIADPEEFLKSSLRDGVVLCKLVERLLPGTTPKYCPDPRNEG
DCIANIREFVKGCSTLKIEGFEPQDLYTGENFGKILSTLLAVNIATQDRGTERSCPQPSA
SAAGQYQSTHTLSTSKSNKSLRRHSKPAVEMAENGGSGGGGNVHVMVKARFNFKQNNEDE
LSFNKGELIHVSRQEDGGWWEGSLNGRTGWFPSNYVREIKPCEKPVSPKTIKGFDVPQLT
KNYYSVVVQDILEHEREFVKELQTVLSCYLRTLQASDKLSSADSATLIGNLEDILTFQQG
LCVALEECAKVPEGQQRLGACYLNLMCQIRTLYLSYCSSHPSAVCVLTDHSEELDKFMES
QGASSPGILTLTTSLSKPFMRLDKYPTLLQELERHVEEAHPDYNDILKANAAFKNLVTQC
QDLRKRKNLELQILSEPVRGWDGDGMKTLGQVSYMSQVQVQSGTSEDKEERYFMLFPNVL
VMLSASPRMSGFIYQGKLPLSGTTVTKQAEDAENGLFAFEITGGGTDGTTVFCSSLQELQ
DWLEHLHAFTKGGSPVGTILKPVEGKPLSMVGTPTHQSPLQSFSTPVASRGLLEPPKVPK
PWSLSCLRPAPPLKPSAALGYKERMSYILKDSSKSPRPIKKFLPARKKERKPSDDEFSLR
KSTAALEEDAQILKVIEAYCTGASVHQITTAVRKESIPQVLLPEEEKIIVEEMKSNGQTV
IEEKSLVDAVYALKDEVHELKKESKLMKHHLEEEQKLRRELERTVRKLAKQKNDSTWDDC
SH
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggcctgttcaagcgggtctgagcccgcaacgcgtttgggggaaaggaagaga
aaaaaaaagcagaagtgtcacggatgtgcgttgcatcctaatagagttcgcagaagtcgt
tgcctctcgggctgctgtgtcttaaaatcagagaggcctgttaaaacgatgaatcctgag
gagcaggtcgtaacgtggctgatatcattaggggtactgaattcccctaaaaagaacatt
gctgatcccgaggaatttctgaaatcgtctttgagagatggggtcgtcttgtgtaaactc
gttgaacggcttctacccggaacgactccaaagtactgtccagatcctagaaacgagggg
gactgtatcgccaacattcgagagtttgtaaaaggatgttccactctgaaaattgagggc
tttgaaccacaggacctgtacacaggggagaattttggcaaaatcctgtccacacttttg
gcagtaaatattgccacccaggatcgaggcacagagaggtcatgtccacagcctagcgca
tcagcagccggccagtaccagtccacacacacgctgtctacctccaagtccaacaagtcc
ctgcgcagacattcaaagccagcagtggagatggcggagaacgggggcagtggtggcggc
ggaaatgtgcatgtgatggtgaaggcacgcttcaacttcaagcagaacaacgaggacgag
ctgtccttcaacaagggcgagctcatccacgtctcgcgccaggaggacggcggctggtgg
gagggcagcctcaacggcaggactggctggtttcccagcaactacgtgcgcgagatcaaa
ccctgtgagaaaccagtttcccccaagactatcaaggggtttgacgtgcctcagcttacc
aagaactactacagcgtggtggtgcaggacatcctggagcatgagcgggagttcgtgaag
gagctgcagacggtgctgagctgctacctgaggaccctgcaggccagcgacaagctgtcc
agtgcagatagtgccacccttatcggcaacctggaggacatcctcacctttcagcaagga
ctctgtgtggctctggaagagtgcgccaaggttccagagggccagcagcggttgggcgcc
tgctatctcaacctgatgtgccagatccgcacgctgtacctgtcgtactgctccagccac
ccctccgccgtgtgcgtgctcactgatcacagtgaggagctggacaagttcatggagagc
cagggggccagcagcccaggaatcctgaccctcaccaccagcctcagtaagcccttcatg
aggctggacaagtaccccaccctgctgcaggaactcgagagacatgtggaggaagcccat
cctgattacaatgacatcctgaaagcaaatgctgccttcaagaacctcgtgacgcagtgt
caggacctgcgtaaacgcaagaacctggagctgcagatcctgtcggagccggtgcggggc
tgggacggcgacggcatgaagaccctgggccaggtgtcctacatgtcccaggtgcaggtg
cagagcggaaccagcgaggacaaagaggagcgctacttcatgctcttcccaaacgtgttg
gtcatgctgtctgccagcccccgcatgagcggcttcatctaccagggaaaactgccgttg
tcaggcacgacggtaaccaagcaggcggaggatgctgagaacggcctcttcgcctttgag
atcacagggggagggacggacggcaccactgtgttctgcagtagcctgcaggagctgcag
gattggctggaacacctgcacgccttcaccaaaggaggaagcccggtgggcaccattctg
aagcctgtggagggtaagcccttgagtatggttggcaccccgacgcaccagagccccctg
cagagcttcagcacccccgtggccagccgagggctcctggagccccccaaagtccccaag
ccctggtctctcagctgcctgaggcccgcgcccccgctcaaaccctccgctgccctgggg
tacaaagagaggatgtcttatatcctgaaggactccagtaaaagccctcggcccatcaag
aaattcctccccgcgagaaaaaaagagagaaagccgtccgatgatgagttctcactccgg
aaaagcacagcagctctggaggaggatgctcagatcctgaaggtgattgaggcgtactgc
acaggggccagtgtccaccagatcaccacagctgtacggaaagagagtatcccacaggtc
cttttgccagaggaggagaagataatcgtggaggagatgaagagcaatggacagacggtg
atcgaggagaaaagccttgtcgatgctgtgtacgcactgaaggatgaggtccatgaactg
aaaaaggagagtaagttgatgaagcatcacctggaggaggagcagaagttacggagggag
ttggagcggacggtccgcaagctggccaagcagaagaacgacagcacctgggacgactgc
agccactaa
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