Clupea harengus (Atlantic herring): 105911495
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Entry
105911495 CDS
T09045
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
char04144
Endocytosis
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105911495 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105911495 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
105911495 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105911495 (nedd4l)
04121 Ubiquitin system [BR:
char04121
]
105911495 (nedd4l)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105911495 (nedd4l)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105911495 (nedd4l)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
105911495 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
105911495
NCBI-ProteinID:
XP_031433580
Ensembl:
ENSCHAG00000022691
UniProt:
A0A6P8GF37
LinkDB
All DBs
Position
12:complement(2197496..2265045)
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AA seq
1250 aa
AA seq
DB search
MSHRLRLYFGAGRSNTAPELEEPDDESIEDGMGFRCTGGAMSFQMQPRQGRVFYEAQPAG
DASLKRSSSMFIPQLSSPEPRPTKSSSMQISLQRSSTPADDALYQDCPPAYPDEPAPAYT
EPAPGWNAPPEYPRGMSAEHTHPNTEPALPKRRVFCGGPGDIQDGYLSGTSPGISIGGFC
IKRNSPDGSEVQQLRILPYGSDSQTGPCHWSVQQNLDGGSGAQRLVFQLQQDQPRHSDFQ
KEAFNLGFIGSKGGRVVRYPRIRLERSTSQPVKPHAIPRRTGSTPDLLGSTSQMDTQSED
ASEDGAQGCTFNIQKEQKLRQPQFKIYFSQGADHCPMSAQDTSLRNGPVRIKPQTRDDFL
GQVDVPLNHLPTEDPAMERPYTFKDFLLRPRRSVLIHKSRVKGYLRLKMAYLPKNGAQEE
DTAEMREEAEGWEDSTDPGTQRPQQLLPPLPPGWEEKVDNLGRTYFVNHNNRTTQWKRPN
TVDVVSETENDNQLREINQEAHRVFRTRRHISEDLENEHQEPRDVDDTWETITEESAVDS
LSQSLPGPSSATPGGPEFSEEISLRLSLTPDSNGELPGPSSAVQSHLSSRLRSSSMTDGV
SEQVQPPPPMQSAQARRSRAQTVTGVEEPMPPSSAAYALTTPGLPPGWEERKDGKGRMYY
VNHNIRSTTWTRPIAQNTEDGASSSAGAGTSGGATPSPGGASGGHLSEPQMRRPRSLSSP
TVTLSTPLEGANNIQVRRAVKDTVSNPQTPQASPFSSPKSTPKTPQSFLPPGWEMRIAPN
GRPFFIDHNSRVTTWEDPRLKYPIHMRTKASLDPGDLGPLPNLPEEPGWEERVHADGRTF
YIDHNTRNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRN
NIFEESYRRIMSLKRPDILKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEY
SATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLGKQIT
LKDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPNGSDMLVTNDNKK
EYIDLVIQWRFVNRVQKQMNAFLEGFTELIIIDLIKIFDENELELLMCGLGDVDVNDWRQ
HTVYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLF
TIEMWGTPDKLPRAHTCFNRLDLPAYDTFEDLREKLLMAVENAQGFEGVD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccggctgcggttgtattttggcgccggccgcagtaacacagcccctgagctg
gaggagcctgacgacgagagcattgaggatgggatggggttccgctgcaccggtggagcc
atgtctttccagatgcagccaaggcagggtagggtgttctatgaggcacagccagccgga
gacgcctcgctcaagcgtagctcctccatgttcatcccacagctcagttctcctgagcca
cggcccaccaagagctcctctatgcagatatccctccagcgttccagcacacctgcagat
gatgcgctttaccaggactgcccaccagcatacccagacgaacctgcccccgcctacaca
gagcctgctcctggctggaatgccccacctgaatacccacgagggatgagtgcggagcac
acgcaccctaatactgagcctgctctcccaaagaggagagtgttttgtggggggcctggc
gatattcaggatggatacttatccggaacttctcctgggattagtattggaggtttctgc
atcaagagaaactccccagatggatcagaggtccagcagctaaggatcctgccctatgga
tcggacagtcagactggtccatgccactggtctgtccagcagaacttggatggtggctct
ggggctcagaggcttgtgtttcagcttcagcaggaccagccgagacattctgactttcag
aaggaggctttcaacctgggtttcattggatctaagggaggacgtgttgtacggtacccc
aggatccgcctggaacggagcacctctcagccagttaaaccccatgccatccctcggcgg
actgggtccactccagaccttttggggagcacctcgcagatggacacccaaagtgaagat
gctagtgaggatggagctcaaggctgcacatttaacattcaaaaggagcagaaactcaga
cagccccagtttaaaatctacttcagccagggtgcagatcactgtcccatgtcagcacag
gatacaagtttgagaaatggaccagtcaggataaaacctcagacaagagatgactttctc
ggacaagttgatgtgcctcttaatcatttgccgacagaggacccggcaatggagcggcca
tacacatttaaagacttccttttgcgtcctcgaaggtcagtgcttattcacaagtcccgg
gtgaaagggtacctccgtctgaagatggcctatctgcccaagaatggagcgcaggaagaa
gacaccgctgagatgagggaggaggcagagggttgggaagactcgactgacccaggcacc
cagcgtccccagcagcttctgcccccactaccccctggatgggaagagaaggtcgacaac
ctgggccgcacctactttgtcaatcacaacaaccgcaccacacagtggaagaggcctaat
actgtggatgtggtgtcggagacagagaatgataaccagttgcgggagatcaaccaggag
gcacatcgtgtgttccgcactcgcaggcacatcagtgaggacctggagaacgagcaccag
gagcctagagacgtggacgatacatgggaaacgatcacagaggagagcgctgttgactcc
cttagccaatccctgccaggtccgtcctcggccacgcctggtggaccggagttctctgag
gagataagcctccgcctgtcactcacccctgactctaatggggagctgcctgggcccagc
tctgctgtgcagagccatctctcctccagactgcgttcctccagtatgactgatggcgtt
agtgagcaggtccagccaccccctccaatgcagagcgcccaggccagacgaagcagagct
caaactgtcacaggcgttgaggagcccatgcctccatcatcagcggcctatgcgctgacc
accccaggcctgccccctggctgggaggagcggaaggacggcaagggacgcatgtactat
gtcaaccacaacatccgcagcaccacctggacccggccgatcgcgcagaacacagaagac
ggtgccagcagctcggctggagccgggaccagcgggggcgccaccccctccccgggcggg
gccagtgggggccacctgagcgagccccagatgcgccggccccggagtctcagctccccc
accgtcaccctctccactccactggagggggccaataacattcaggtacgtcgagctgtg
aaggacaccgtgtccaatccccagacgccacaggcctcccccttcagctcccccaagtct
acgcccaagactccccagagcttcctaccacccggctgggagatgaggatcgcccccaat
ggacggccgttcttcattgatcacaacagcagggtcaccacctgggaggacccacgcctg
aaataccccatccacatgaggacaaaagcatccctggaccctggtgaccttggcccgctt
ccaaatcttccagaggagcctggctgggaggagcgtgtgcatgctgatggaagaaccttc
tacatcgaccacaacaccagaaatacgcagtgggaggaccctcggctccagagccctgcc
atcacaggccctgctgtgccatactcaagggagttcaaacagaaatacgattacttcaga
aagaagttaaagaaaccggcggatatccccaaccgctttgagatgaagctccacagaaac
aacatcttcgaggagtcgtatcggcgcatcatgtcgctgaagcgaccggacatcttgaag
gcgcgcctgtggatagagtttgagtctgaaaagggcctggactatggcggtgtggcccgt
gagtggttcttcctgctctccaaggagatgttcaacccctactacggcctcttcgagtat
tcagccacggataactacaccctgcagatcaaccccaactcaggcctctgtaacgaggac
cacctctcatacttcaagttcattggacgcgtggcaggcatggctgtgtaccatgggaag
cttttagacggcttcttcatccgccccttctataagatgatgctggggaaacagatcaca
ctgaaggatatggagtctgtggatagtgagtactacaactccctcaaatggatcctggag
aacgatcccactgaactcgacttgcggttttgtattgatgaagacaactttggccagaca
taccaggttgacctgaaacccaatggctcagatatgttggtcacaaatgacaacaaaaag
gagtatattgatcttgtcatccagtggaggtttgtgaaccgggtgcagaaacagatgaat
gcctttctggagggtttcactgaactcattattatcgaccttatcaagatatttgatgag
aatgagctagagctcctgatgtgtggtctgggtgatgtggatgtgaatgactggaggcag
cacacggtctacaagaatggctactgccccaaccatcctgtcattcagtggttctggaag
gctgtgcttctgatggatgcggagaagaggatccgtctgctacagtttgtcactgggacg
tcccgagtgccaatgaacggcttcgctgagctctatggttccaatgggccccagctcttc
accatagagatgtgggggacgcctgataagctgccccgagcgcacacctgcttcaatcga
ctggacctgcctgcctacgacacgtttgaagacttaagagagaagctgctgatggctgtc
gagaatgcccagggctttgagggagtggactaa
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