KEGG   Clupea harengus (Atlantic herring): 105911502
Entry
105911502         CDS       T09045                                 
Symbol
ptpn13
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    105911502 (ptpn13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:char01009]
    105911502 (ptpn13)
Protein phosphatases and associated proteins [BR:char01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    105911502 (ptpn13)
SSDB
Motif
Pfam: PDZ Y_phosphatase PDZ_6 PTN13_u3 FERM_M PDZ_2 FERM_C FERM_N Tc-R-P KIND DSPc PTP-SAK PTPlike_phytase PTP-NADK
Other DBs
NCBI-GeneID: 105911502
NCBI-ProteinID: XP_031433717
Ensembl: ENSCHAG00000019401
UniProt: A0A6P8GDZ7
LinkDB
Position
12:complement(1630449..1694031)
AA seq 2563 aa
MHVSLAEALEVRGGPLEEEEVWALLSQSAESLQELLRRDPSALGFIISPWSLLLMPSGNI
SFTDENVTQQDLRAFTAPEVLAGLNLSSVSDIEKMHMYSLGMTLFWGADYEIPQSQPMKL
GERLNTLLLSMCEDSTLTRMSVRTAQDACSAHIRSSSAEPSFSYVRRLVRLVLGSLSQLD
GLLSQTERESLPERSKEIRERLRGKGLPAGRSAAHRVLERYRARSQEHAGLNRGLSRSMS
SLPVQEVLRADDSALHYPPSEFHPGSESSAELYPNLLSQTHAQPQPQARGRLTDTGRKAP
SQRSEQRRKNWASAVDLACLDPEMLHWGGLEEARRGSSALSTRSAGRHRSASRPKEGRHS
DFSGLQHPRAHHLPALSVSSALSSAYDRIRERQRKLHALQQAMDDPLHTHRRYHSDYSSS
SESPSVTSSDPEYRQVKKHEDGRRSSSQVALSEHDSMSLSRQRLLEAGPDETLGTELLIQ
RQEEQIHRLQARLSHASIHPVEDTRIRTSFYPSDDLRTSMLDLREPRRSSPLDGTVVHRK
PKNFYGPEFVKMASEPCVVLSVPSSIMNKRGKVEESQRKVGVVLLNSQRLELSSDVKAVC
KDVLDMVVAHVGLVEHHLFGLACLRDDEFFFVDPDAKLTKVAPDGWKEDPKKKKTDVNFN
LFLRIKFFLDDVNLIQHMMTKHQYYLQLRKDILEERMRCDLESAMLLASLALQAEFGDYQ
PELHGKTYFRMEHYLPASAMDKFDQTSIKEDLPKLHSSYYGVSEEEAEFEFLKVCQRLTE
YGVHFHRVLPEKRSQTGIMLGVFSKGVLIFEVLNSNRTPVLRFPWRETKKISFIKKKISL
QNTSDGIKHLFQTDSQKTCQYLLNLCSAQHKFHLHMKARQSNQETKDLENCPLSSLQFST
PPEGMGRAVSVLSLAPSARSESEHLKRMSCSEAALNKHHLGRLHAPIDPSYPGYVPNPNP
NPRLLSRSHHNLGQLPESPEHRAGLSYGSQSQSSASRPSTQLPSHHRACSDTDSITVSRQ
QDTSAFSSLVHSNPHWSPEKFKKESDSSSCEETANAYVVGVSMASSGLPSTPAPLTVSDS
LKKKLNALPSPEREIMTVNLKKDAKYGLGFQIVGGESSGRMDLGTLISSITPGGPADING
CLKPGDRLISVNDLNLEGLPHEAAVEILQNASDDVTLMVSQPKERLFEGSPSSFPRYSAT
SPVTIAAQRTEADLDSSSEENAGSPSPPPPAPSVSVSPPGRRQESLNNSHTDSTSLPQAQ
LNGFHRSPPPEGPPAAQPTQDGTPPALPPKTRKAQKVQEMPKEPESSDRGDSDMDEETYS
GSQEKLKLQKELSPSCIMGNLSGNAPGVNSLQPGDLFDVELSKIDSSLGISVTVLFGKGG
SNTTVKHGGIYVKAIIPKGAAELDGRIQKGDRVMAVNGKSLEGATHKQAVEALRETGQVV
HLLLEKGQPLADSIHAPLTPQTTAEPPKAKPRAAQKHPPDYHFVTDDNVFEVGLLKNSSG
LGFSFSREENVPGEPAPTSMVRVKKLFPGQPAAESDKIEVGDVILRVNQTSLKGLSQHEV
ISALRGAGQEVTLLLCRPDKGLLPEMDSSLVTPKVSPRKEVHAHPVPSQPRTGSPAGGDS
QPRTGSPAGGDSQWSLGPVEEALERLLMKSPSRRDSYSDSTDDDEEVEEAFSPSLEHSSQ
SWDRSVYQTPSNNTPLGRLSQYESPCELDDTVRSAYYSPNQSICRTDLNRRCPSSSPMTV
ELDSTLQPILSSSVSPDRAGLSPSPDPLPPPLPVPTDLSLPNHSQDIEEFVPEVELKVSL
VKSDKGSLGFTLTKGNDLSCYIHDIIQDPAKGDGRLRPGDRMIMVNNSEVSGMGHTEVVN
LVRAAPRVVDLVVGRVLEAPKPPFEAHLLPDITYQCQEDSLGLVLEGGSDNLLGLLYVKE
VAPGSVAAGEGSLRPLDLIHFINGAPTHDLTLSESRRLLELSLRNLTLKATRDGKPVTPR
QKSVSHLNNNLSSKVNTSQSMNGYLHGERNDLEVLSSICPSEEQLIQLHLEKPLSGGLGF
SVIGGERGIFVKSITPGGVAHTSGELQVGDRLLKVNDELMTGVSHSKAVTTIRKAKGVVH
LIVSRPPDQTPSTYLGFLPLSSDKCNGNTDVSEDSGVRTKVHSPADGHKSSSEKGAPVIP
PIDYDMGSKENKTEGNTDLSEDTDCDGSSLPEDSPETSRRADWKEECVDSPSDERSTILS
YLQTSDGQLEEDEITWGSDDLPIENINSKFSEDGPIVVEEELTSLPLVKVIPDGQYTGPK
LNTVVRMMRGLLEQKVPLQEFENLQNLQPLDDCLIGQTQENKKKNRYKNIVPFDTTRVLL
GKEGGYINANFIKMLVKDECFMYIACQGPLPTTLGDFWQMVWEQKSNVIAMMTQEVEGGK
VKCQRYWPDTPRTAEMVDDRLQITLVKDQHLDNFVIRLIEVKDIQTNEIQQVTHLNYTGW
PDHGTPTQPEQLLTFISYMRHIHQSGPIITHCSAGIGRSGTLICIDVVLGLISKDVDFDI
SDVVRTMRLQRQGMVQTEEQYIFCYQVILYVLRCLQAEETISG
NT seq 7692 nt   +upstreamnt  +downstreamnt
atgcacgtgtccttggctgaggcgctggaggtgcggggaggcccactggaggaggaggag
gtgtgggctctgctcagccagagcgctgagagtctgcaggagctgctgcggagagatccc
tccgccctgggcttcatcatctccccctggtccctgctgctcatgccctccggaaacatc
tccttcacggacgagaacgtgactcagcaggacctcagggccttcacagcaccggaggtc
ctcgccggactcaacttatcctcagtgtctgacattgagaagatgcacatgtactctctt
ggtatgaccctgttctggggagccgactacgagattcctcagtctcagcccatgaagctg
ggggagcgtctgaacaccctgctgctgagcatgtgcgaggactcgacgctgacgcgcatg
tctgtgcgaaccgcgcaggacgcctgcagcgcacacatccgcagctccagtgcagagccc
tctttctcttatgtccgcaggctggtgcgcctggtgttgggcagcctctctcagctggac
gggctgctgtctcagaccgagagggagtccttgcccgagcggagcaaagagattcgcgag
cgattgcgaggcaaaggcctccccgcagggcggagcgcggcccatcgtgtcctggagcgc
tacagggcccgctctcaggagcatgctggactgaaccgaggcctgagccgctccatgagc
tcgctgcctgtgcaggaggtgctccgggcggacgacagcgctctccactaccccccgtca
gagttccacccgggttccgagtcctccgccgaactctaccccaacctgctgtcccagacc
cacgcccagccccagccacaggcccgcggccggctgaccgacaccggcaggaaggccccg
tcccaacgcagcgagcagcgccgcaagaactgggcgtcggccgtggacctggcctgcctg
gacccggagatgctgcactgggggggcctggaggaggcgcggaggggcagcagcgctctg
agcacccgctccgccggacgccaccgctccgcctcccgccccaaggagggccgccactcc
gacttcagcgggctgcagcacccgagggcccaccacctgccggcgctgtccgtcagctcg
gccctcagcagcgcctacgatcgcatccgcgagaggcagaggaaactgcacgcgctgcag
caggccatggatgatccccttcatacccacagaagataccacagtgactacagctcttcc
agcgaaagcccctcggtgacgtcctcagatcctgaatacagacaagtcaagaaacacgaa
gatgggcgaaggagcagctcacaggtggctctgtcagagcatgacagcatgtccctcagc
agacagaggctgctggaagcgggtcctgatgagactctgggcaccgagctgctcatccag
cggcaggaggagcagatccaccgcctccaggcgcgcctctctcacgccagcatccaccca
gtggaggacacccgcatccgcaccagcttctacccctcagacgacctccgcacctcaatg
ctggatctgcgcgagcctcgcagaagcagtcctctggatgggacggtggttcaccgcaag
cctaagaacttttacgggcctgaatttgtgaagatggccagcgagccttgtgttgtgttg
agcgtcccctcctccataatgaataagcgcgggaaggtggaggagagccagcggaaggtg
ggggtggtgctgctgaacagccagcgtctggagctcagcagcgatgtgaaggcggtgtgc
aaggacgtgctggacatggtggtggctcacgtgggcctggtggagcaccacctctttggc
ctggcctgcctgcgagacgacgagtttttctttgtcgaccctgatgccaaactgaccaaa
gtggcccctgatggctggaaggaagatcccaagaagaagaaaactgatgtcaacttcaat
ctgttcctgcgcatcaagttcttcttagacgatgtgaacctcattcaacacatgatgacc
aaacaccagtactacttgcagctgcggaaagacatcttggaggagaggatgcggtgtgac
ctggagagcgccatgcttctggcctcgctcgctctgcaggcagagtttggtgattaccag
ccggagctccatgggaagacatatttcaggatggagcactatctgcctgcctccgccatg
gacaagtttgaccagacctccatcaaagaggacttgcccaagctacacagctcctactac
ggagtctctgaggaggaggctgaatttgagttccttaaagtgtgccaacgactgaccgag
tacggtgtccacttccatcgcgtgctgccagagaagaggtctcagacaggcatcatgctg
ggtgtcttctccaaaggtgttctgatctttgaggtcctgaatagtaatcggactcctgtg
ctgaggttcccctggagagaaacaaagaaaatctcgttcattaaaaagaagatctctctc
cagaacacctccgacggcatcaagcacctgtttcagacagacagtcagaagacctgccag
tatctgctgaacctctgttccgcccagcacaagttccacctgcacatgaaagccagacag
agcaatcaggagaccaaggacttggagaattgcccattgagtagcctgcagttctccact
ccacctgaagggatgggtagggcagtgagcgtgctcagtctggcccccagcgcacgttcg
gagagcgagcacctcaagaggatgtcctgctcggaggccgctctgaacaagcaccacctg
ggccgactccatgcccccattgacccctcgtaccccggctacgtgcccaaccccaacccc
aacccccgcctcctgagccgctctcatcacaacctgggccagctgcccgagtcgccggag
caccgggcgggcctctcctacggcagccagtcccagagcagcgcgtcgcggccctccacc
cagctgccctctcaccaccgcgcctgctccgacacagactccatcacggtcagcagacag
caggacaccagtgctttcagctctctggtccacagcaacccccactggagccccgagaag
tttaagaaggagtcggactcctcctcctgtgaagagacagccaacgcctatgtcgtaggt
gtgagcatggcaagctcaggactcccctccacccctgcgcctctgacagtcagtgattct
ctgaagaagaagctgaatgccttgccttcccctgagagggagattatgaccgtgaatctg
aagaaggatgcaaagtatggtctggggttccagattgtaggaggagagagctcaggacgg
atggatcttgggactctgatcagctccataactcctggaggtccagctgacatcaacggc
tgcctgaagcctggagaccggctcatctcagtcaatgacctcaatctggagggacttcct
catgaagctgctgtggagatccttcagaacgcctctgatgatgtcacactcatggtgtct
cagcccaaagagaggctatttgaaggctccccttcaagcttccctcgctacagcgccacg
tcccccgtgaccattgctgctcagaggacggaggcagatttggactcgtcatctgaggag
aacgcagggtcccccagtccccctccaccggcccccagtgtctccgtgtccccaccgggc
cgacgccaggagagcctgaacaactcccacacggacagcaccagtctcccccaggctcag
ctcaacggcttccaccgcagcccccccccagagggcccccctgcagcccagcccactcag
gacggaaccccacccgctctgcctcctaagaccaggaaagcccagaaggtgcaggagatg
cccaaagaacccgaatcttcagacagaggagactcggatatggatgaggagacatactct
ggtagccaagagaaacttaaacttcaaaaggagctatctcccagctgcatcatgggaaat
ttaagtggtaatgccccaggggtcaatagtctccaacctggagatctatttgacgttgag
ctgtccaaaatagacagcagcctgggcattagtgtgacggtactgtttggaaagggtgga
tcaaacacaacagtgaagcatggaggaatctatgtcaaagccatcatccctaaaggagcg
gcggagttggatgggagaattcaaaaaggtgatcgagtaatggctgtgaacgggaaaagc
ctggaaggagctacacacaagcaggctgtggaagctcttagagagacgggacaagttgtc
cacctgctgctagagaagggtcagcccctggctgatagcatccacgccccactcacccca
cagaccactgcagagccacccaaggcgaagcccagagcagcccagaaacatccccctgac
taccactttgtgacagacgataatgtgtttgaggttggcctgctgaagaactcctctggc
ctaggcttcagcttcagtcgtgaggagaacgttccaggggaaccagccccgaccagcatg
gttcgagtgaagaagctgttccctgggcaaccagctgctgagagtgacaaaattgaagtg
ggcgatgtcatcttgcgcgtcaatcagacttcactcaagggcctgtcacaacatgaggtg
atctcagctctgagaggagcaggacaggaggtcactctgctgctctgtaggcccgacaaa
ggacttctgccagaaatggactcctctctggtgacccccaaggtttcccctcgcaaggag
gtccatgctcatcctgtgcccagccagccgaggacaggctctcctgctgggggggacagt
cagccgaggacaggctctcctgctgggggggacagccagtggagcctgggcccggtggag
gaggctctggaaaggctgctgatgaaatcccccagccgccgggacagctacagtgacagc
acagatgacgacgaggaggtggaggaggccttcagcccttccctggagcacagtagccaa
tcatgggacaggagtgtttaccaaacccccagcaacaacactccgctgggaagactcagc
cagtatgaaagcccatgcgagctggacgatacagttcgatcagcctattactctcccaac
cagtccatctgcaggacagatctcaacagaaggtgtccatcctcttcccccatgacggtg
gagctggactccaccttgcagcccatcctgtcatcatcagtcagcccagacagggcgggc
ctgagtcccagcccagaccccctgcctcccccgcttcctgtgcccacagacctcagcctc
ccaaaccacagtcaggacatagaggaatttgtgccggaagttgagctgaaggtctctctc
gtcaagtcagacaaaggaagtttgggatttaccctcaccaaaggaaatgacctcagttgc
tacatccacgacatcattcaggacccagccaaaggcgacggacgactgcgccctggagat
cgcatgataatggtaaataactctgaggtgtccggcatggggcacacagaggtggtgaac
ctggttcgagcggcacctcgagtagtggacttggtggttgggagagttctggaagctcct
aaacctccttttgaagctcacctactgcctgacatcacctaccagtgccaagaagattct
ctgggtctggtgttggaaggcggtagtgataacctgctgggattgctctatgtgaaggag
gtggccccaggatcagtggcagcgggcgagggcagcctgagacccctggacttgatccac
ttcatcaacggcgccccgacccacgacctcacccttagtgaaagtcgcaggttgctggag
ctgtcactcaggaacctcacattgaaggccaccagagacgggaagccagtgactccacga
caaaagagcgtctcgcatcttaacaataacctaagctctaaagtaaacacatcacaaagc
atgaatggttatctccatggcgaacggaatgatttagaagtcctttccagtatctgtcca
tctgaggagcagctcattcagctgcacctggagaagccgctctctggaggcctgggcttc
tcggtcatcggaggggagaggggcatttttgtgaagtccatcacgcctgggggagtggct
cacacctccggtgagctgcaggtgggagaccggctgttgaaggtgaatgatgagctgatg
acaggagtgtcccactccaaagccgtcaccaccatcaggaaagccaaaggcgtggtacat
ctgattgtgtccaggcctcctgatcaaacccctagcacgtacttgggcttcttgcctctt
agctcggacaagtgcaatggaaacacagatgtgagtgaggacagtggagtgcgaactaaa
gtgcacagcccagcagatggtcacaagtccagcagtgaaaaaggcgcacctgtcatccca
cccatagactatgacatgggttctaaggaaaacaagacagagggcaatacggatctgtca
gaagacacagactgtgatggttcttctctgcctgaagactcacctgagacttcaaggaga
gcagactggaaagaagaatgtgtagatagcccttcagatgagcgatccaccattctcagc
tatctgcagacaagtgatggccagttggaggaggacgagatcacttggggcagcgatgat
cttcctattgagaatataaactccaagttctcagaggatggacctattgttgttgaagaa
gagctgacatctttgcccctggtaaaagtcatccctgatggtcaatacactggccccaaa
ctgaacacggtggtccgaatgatgcgaggtctgctggaacagaaggtccccctgcaggag
tttgagaatttacagaatctgcagcctcttgatgactgtttgattggacagacgcaagaa
aacaaaaagaaaaatcgttacaaaaatattgtacctttcgacaccactagagtgcttctt
ggcaaagaaggtggatacattaatgccaacttcataaagatgctagtgaaggacgaatgt
tttatgtatattgcctgccaaggaccactacccaccactcttggggacttctggcaaatg
gtctgggaacagaaatctaatgtcattgctatgatgacccaggaagtggaaggaggaaag
gtgaaatgccagagatactggccagatacacccagaacagcagaaatggtagacgacagg
ctccagatcactctagtgaaggatcaacacctcgacaactttgttattcgactgattgag
gttaaagatattcagactaatgagatccagcaggtcacacacttaaactacactggctgg
cctgaccacggaacacccacacagcctgagcaactgctcacattcatctcctacatgaga
cacatccaccaatcaggacccatcatcactcactgcagtgcagggattggcagatcaggt
actctgatctgtatagatgtggttctgggactcatcagcaaagatgtagattttgatatt
tcagatgtggtccgtactatgaggcttcagagacaaggaatggttcaaacagaggaacaa
tacattttctgctatcaggtgattttatatgtgctcagatgtcttcaagcagaggagact
atctcaggatag

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