Clupea harengus (Atlantic herring): 105911553
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Entry
105911553 CDS
T09045
Symbol
slc18a2
Name
(RefSeq) synaptic vesicular amine transporter
KO
K08155
MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105911553 (slc18a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105911553 (slc18a2)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC18: Vesicular amine transporter
105911553 (slc18a2)
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
105911553 (slc18a2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
105911553
NCBI-ProteinID:
XP_012695825
Ensembl:
ENSCHAG00000027862
UniProt:
A0A6P3WDD4
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All DBs
Position
13:12398666..12419139
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AA seq
522 aa
AA seq
DB search
MGALDSLREFSFLTWLRERRESRKLILLIVFIALLLDNMLLTVVVPIIPSYLYTMDDEAV
LSTPTSPPSPPSSTFQSIVSLYDNFTYETSGLLSTPRPLAPSTAIAPASASASALAPANA
TGPDCHKGDKQLLNENVKVGLLFASKATVQLITNPFIGPLTNRIGYQIPMFAGFCIMFLS
TIMFAFSKSYTLLFLARSLQGVGSSCSSVAGMGMLASVYTDDEERGNAIGIALGGLAMGV
LVGPPFGSVMYEFVGKTAPFLILAVLAVLDGALQLFILQPSKVEPESQTGTPLLTLMKDP
YILIAAGSICFANMAIAMLEPALPIWMMETMCPRKWQLGVAFIPASVSYLIGTHIFGVMA
HKMGRWLCSLIGMLLVGVSILCVPFAKDIYGLILPNFGVGFAIGMVDSSMMPIMGYLVDL
RHVSVYGSVYAIADVAFCMGFALGPSAGGAIARSIGFPALMTIIGIIDILYAPLCYFLRS
PPAREEKMAILSDSNCSMKTRSYSMQGTSYQMGDDFETESDE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggagcattagattctctgagagaattcagttttctgacatggctgagagaaagaaga
gagtccagaaaactgatcttgctaatcgtattcatcgctcttctgctggataatatgctt
ttgacggtggtcgtgcccataatccccagctacctttacacaatggatgatgaggctgtt
ctgagtacccccacgagtcccccctctcctccctccagcacgttccagtccattgtgtca
ctttatgacaactttacgtatgagaccagtggcctgctctccactccgcgaccactggct
ccctccacagccatcgccccagcctcagcctcagcctcagccttagcccccgctaacgcc
actggaccagactgccacaaaggcgacaaacagctcctcaatgagaatgtgaaagtagga
ctcctctttgcctccaaggccactgtgcagctcatcaccaatcctttcatcgggcccctc
accaacagaataggttaccagatccccatgttcgctggcttctgcattatgtttctctcc
actatcatgtttgcattctcaaagagctacactctgctgtttctggcccgatctctacag
ggggttgggtcctcatgctcctcagtagcaggaatgggaatgctggcaagtgtgtatact
gacgatgaggaaagaggcaatgctataggaatagctcttggaggactagccatgggagta
ctggtgggtcctccgtttggtagtgtgatgtacgagtttgtcgggaagaccgcgcctttc
ctcatcctggctgtcctggctgtgctggatggagcgttacagctcttcatcctgcagccc
tcgaaggtggagccagagagtcagacaggcacgccactcctaacgctcatgaaggacccc
tacattctgatcgctgcaggttccatttgttttgctaatatggccattgccatgttggag
ccggctctgcctatttggatgatggagaccatgtgccccagaaaatggcaactcggtgtt
gcgttcattcctgccagtgtgtcttacctcataggcacccacatctttggcgttatggca
cacaaaatgggcagatggctctgctcccttattggaatgcttctggtgggggtcagtatt
ctctgcgtgccttttgccaaagacatctatggactaattctgccaaactttggagtaggg
tttgctatcgggatggtggattcctccatgatgcccatcatggggtacctggtagacctg
cggcatgtgtctgtctatgggagtgtgtatgccatcgctgatgtggcgttctgcatggga
tttgcattgggtccctcagctggtggggccatcgctcggagcatcgggttccccgccctc
atgaccatcattgggatcatcgacatcctctatgccccgctctgttacttcctcagaagt
ccccctgccagagaggaaaaaatggccattctcagcgactcaaactgctcgatgaagaca
cgctcctattctatgcagggcacgagctaccagatgggtgacgacttcgaaactgagagt
gatgagtag
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