KEGG   Clupea harengus (Atlantic herring): 105911573
Entry
105911573         CDS       T09045                                 
Name
(RefSeq) protein bicaudal C homolog 1-like
  KO
K18756  protein bicaudal C
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105911573
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105911573
SSDB
Motif
Pfam: KH_BICC1 KH_1 KH_BICC1_1st KH_GLD-3_1st SAM_1 KH_KHD4_2nd KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_YLL032C_2nd SAM_7 KH_Mug60-KHD4 KH_NusA_2nd SAM_Ribosomal_mS41 KH_2
Other DBs
NCBI-GeneID: 105911573
NCBI-ProteinID: XP_031435183
Ensembl: ENSCHAG00000027860
UniProt: A0A6P8G6Q6
LinkDB
Position
13:12331560..12370659
AA seq 920 aa
MGCPFFLSTAASEGRINGGEDFFQTVMDETNTQIAWPSKLKIGAKSKKDPHIKVCGKRDS
VKEAKERIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRN
NQAEKSNQVSIAGQPAGVEAARAKIRELLPLVLMFELPALVQADPSSPTLQHLCQTYSFT
VSFKPPSRLYGATGVVRGSQNNASAVQRGMALLLEHLAGSLASAVAVSTQLDIAPQHHLF
MMGRHSSNVKHISQRTGAQIHFPDPSTPHTHRKSTVYIQGSVDAVCLARQHLMGCLPLVL
IFDVKEDVEPQCVSALMEQLDVFISIKPKPRQPSKSVIVKSVERNAGNMYEARKILLGLE
NRDISSPSINGHSPSSNGHASSPTLLCPVGLDILASAGLGLSTLGLLSSAVGPSLNGSSA
PNSALNGSKASVGSPPGPCTASLWTNALTTSSSTQCFSSALMLHPASQASLSSMLLSGVQ
AFTQSTPSPPPGLTPIHKPTGGPTADCHLNGHVKHPGSVYGRMSAASLADVVLSPAHCDP
SPQPNTHNPAEPLSSKSSSDEGSDTFVEVGMPRSPSHSANGNDLKQMLASCKTGKRQTVE
LLQGTKNSHLHSDCLLSDADASSSESPLGDKRAPGSERAAERAAQQNYERIGLGPQSATY
ANMEVFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHISY
KPTMSTTYEDSPLSLSRSGSRECIGNGIESDNWRERIANTTGNGTASRIQGHSEFPPSVG
SPKRKMNKSAVEHYLSGTNYMDCISSMNGSNGCSLNASLKGSELPELFSKLGLGKYIDVF
QQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFDPPNIRSSFLDGG
ASGRLPRQFHADMASVSGRW
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgggctgtcccttttttctttcaacagcagccagtgaagggaggataaatggaggagaa
gacttctttcagacggtaatggatgagacaaacacacagattgcctggccatccaaactc
aagataggagccaagtccaaaaaagatcctcacatcaaggtctgtggaaagagagacagt
gtgaaagaagccaaagagagaatcatgtcggtgctcgacaccaagagtaaccgggttacc
ctgaagatggacgtgtcccacactgagcactctcatgtcatcggaaagggtggcaacaac
atcaagaaggtgatggaggagacgggttgccacattcacttccccgactccaaccgcaac
aaccaggccgagaagagcaaccaggtgtctatagcaggccagccggcaggagtggaggct
gccagggccaaaataagggagctgctgcctctggtgctgatgtttgagttacctgcgttg
gtccaggccgaccccagctcccccaccctgcagcacctgtgtcagacctacagcttcacc
gtctccttcaagcctccgtcgcgcctctacggggccaccggggtggtgcgcggatcccag
aacaacgcctctgctgtgcagagaggcatggccctgctcctggagcacctggcgggctcg
ctggcgagcgcggtggcggtgagcacccagctggacatcgcaccccagcaccacctcttc
atgatgggccgccacagcagcaacgtcaagcacatcagccagcgcaccggcgcccagatc
cacttcccggaccccagcacgccgcacacgcaccgcaagtccaccgtctacatccagggc
tccgtcgacgccgtttgcctcgccaggcagcacctcatgggttgtctgccgctggtgttg
atttttgatgtgaaggaggacgtggagccgcagtgtgtcagtgccctcatggaacagttg
gacgtcttcatcagcatcaaacccaaacccagacaaccaagcaagtctgtgatcgtgaag
agcgtagagaggaatgcggggaacatgtacgaagcccggaagattctgctgggcctggaa
aaccgtgacatcagctcgcccagcatcaatggccactctccttcctccaatggccacgcc
tcctcacccaccctcctctgtccggttggcctggacatccttgcctcagctggcctgggg
ctaagcactctgggcctcctcagctctgcagtagggccctctctgaacgggtcgtcagcc
ccaaactcagccctgaacgggtcaaaagccagtgtgggctcccccccagggccctgcacc
gcctccctctggaccaacgccctcaccacctcctccagcacacagtgcttctcgtctgcc
ctgatgctgcaccctgcgtcccaggcctctctgagcagcatgctgctgtctggagtgcag
gctttcacccagagcaccccctcccctccccccggcctcacccccatccacaaacccaca
ggcggacctaccgcagactgccaccttaatggccatgtcaagcatcctggttctgtgtac
ggtcgcatgtccgctgcttctctggctgatgtggtcctgagtccagctcactgtgacccc
tcccctcagcccaacacacacaacccagcagaaccgctgtccagcaagtccagctctgat
gaaggttcagacacttttgttgaagtgggcatgcccaggagtccgtctcactcggccaat
gggaacgacctgaagcagatgctggcgtcttgtaagacagggaaaaggcagactgtggag
ctgctgcagggcaccaagaactcccacctgcattcggactgcctgctgtctgacgctgac
gccagctcctcagagagcccactgggggataaacgggctcctggcagtgaacgggcagct
gagagggcagcccagcagaactatgagcggatcgggctggggccgcagtccgccacctac
gccaacatggaggtctttgactatgaacagaagaagctgctggcaaccaaagccatgttg
aagaagccagtggttacagaggtgcggactcccaccaacacatggagtggtctgggcttc
tcaaagtccatgccggccgaaaccattaaggagctccgccgagccaaccacatctcatac
aaacccaccatgagcactacatatgaggactctcctctctccctgtctcgctccgggagt
cgggaatgtatcgggaacggcatcgaatcagacaactggcgggagcgtatcgcaaacact
accggaaatggcacggcgagcagaattcagggacactccgaatttccgccatccgtcggc
agtccaaagcgaaagatgaataaatctgcagtggagcactacctgagcggcactaactac
atggactgcatctcctccatgaacggcagcaatggctgctctctgaacgcctccctgaag
ggctccgagctgcctgagctcttcagcaagctgggcctgggcaaatacatagacgtcttc
cagcagcaggagattgatctgcagacgttcctcacactcaccgaccaggacctgaaggag
ctcggcatcaccacattcggagctcgccggaaaatgctgctggccatctcagaactgaat
aagaaccgtcggaaactctttgatccgcccaacattcgctcatctttcctagatggtggt
gccagtggtcgtcttccacggcagttccacgccgacatggcgagtgttagcggccgctgg
tga

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