Clupea harengus (Atlantic herring): 105911626
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Entry
105911626 CDS
T09045
Name
(RefSeq) muscular LMNA-interacting protein
KO
K27832
muscular LMNA-interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105911626
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
105911626
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MLIP
RR_TM4-6
PBP_sp32
PPP4R2
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
105911626
NCBI-ProteinID:
XP_012695906
Ensembl:
ENSCHAG00000017155
UniProt:
A0A6P3WDI8
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Position
13:10841410..10861676
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AA seq
925 aa
AA seq
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MLLPVSRHRSFSPHKTHPGEDMEMEHVNGSLDKATTVASANFTSFSFVPILTKLPAKSRI
IHVGRKLLSSLHPNQSVEEPDRDASGENTMEGGVYKAEFVYIRDSEETPPADSPRETTHA
LKLKAPSADLIAQPSPPPSPLSYTPVPALSEKMIRHSGNSSPASTHATVETKPDKHEGLS
SRSGCRSTSPCAGVGGSGGLYFNHEQEQEQEQEQEQEQQQEQEQEQEQEQEQEQEQEQEQ
EQDETLSAATSVELLTSPVSSSRESILSEGWERDKSWSAPYLLSPAPSPALSSLSCTWSP
CSSVRSGAFSPAVVRVTRHSLAPGASLVRMAPSGGGSCSSSCAVSRGSSPCPSPSPRARH
RPPPTQLSLLTAILRKGRLPVLSSSVQRPYSPCWPISPVHMSSCPACRAAARVGSVLGGA
SVSQDSTHTTPHHHTSCLKETLELKSLNSAVKEPRCISPLVGVYTTHTSISQSEPSKSGP
SCYTTGSRLSSPAMRTFTSERLPADCPRRVLKPVNAEIRVSPAPSPQLYTSFSKLSRSLS
PKPSYALNLDAESQPCHSSASPARPRSNAQPASGSENDSGVSRHPSDEPSPVTHSHRLSP
LPRIPPLSFLRRTPTPCLLPPKPDSCPPTPDRFTLSPSPATLSRDLTPSPSFPPSLTPSP
TLKGRVSVSADREDKKSQPYKIKSFYKTLAAIPTNSLLMEQQAIDNEVDKNENSVDPSEQ
FLMEEARAEMCSPAQLRAQSEELYAAIDEVLESPVSFRRPLLSPSPTMRWEETDSAKRYT
PRSSPRTVGRETKYAAYHLQSLGLTEQHATKPGVIRPASVTSRFPTDSEEERYSPNPFKT
YLNNHPGNNPNKFASSLVGEPEADGRRPLSSQPTAKNTSSGGMKFSLLPPTLRLTATEEA
LSAQATAPSPLSTTLAKMEVHETDI
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcccagtgagcagacacagaagtttttcgccccataagactcacccgggggaa
gatatggaaatggagcacgtaaatggcagccttgacaaggcaacaactgtagcctcagca
aacttcacatcattcagctttgtgccaattctgacaaagcttccagcgaaaagcagaatc
atacatgttgggagaaaattgctgtcatcacttcatccaaaccagagtgtagaggaaccc
gacagagacgcatcgggtgagaacaccatggaagggggtgtttacaaggcagagtttgtc
tacatcagagactcggaggaaaccccaccagctgactcgccccgagaaacaacacatgca
ctaaagctgaaggcaccctccgctgatctgattgctcaaccctcacccccaccctcaccc
ttgtcctatacccctgtccccgctctcagtgagaaaatgatccgccactctggtaactcc
agccccgcctctacgcatgcaaccgtggaaaccaaacctgacaagcacgagggcctctcc
tctcggtctgggtgtcgcagcacgtctccgtgtgccggcgttggtgggagcggggggctc
tatttcaaccacgagcaggagcaggagcaggagcaggagcaggagcaggagcagcagcag
gagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcag
gagcaggatgagaccttgagcgctgctacttccgtcgagctgctcacctccccggtctcg
tcgtcgcgggagtccatcctctccgagggctgggagagggacaagagctggtcggctccc
tacctgctgtcacccgcgccgtccccggcgctgtcgtctctcagctgcacctggtcgccg
tgctcctccgtccgctcgggggccttctcccctgcggtggtgcgcgtcacgcgccactcc
ctggcgcccggcgccagtctggtgcggatggcacccagtggcggcggcagctgctcctcc
tcgtgcgccgtcagccgggggtcgtcgccgtgcccctccccgtcgccgcgcgcccgccac
cggcccccgcctacgcagctctcgctcctcacggccatcctgcggaagggccggctgccc
gtgctgtcgtcctccgtgcagaggccctactccccctgctggcccatcagccccgtccac
atgtcctcctgccccgcctgccgcgccgccgcacgcgtgggatccgtcctgggtggggcg
tctgtgtcgcaggactccacacacaccaccccccaccaccatacgtcgtgtctcaaagaa
acgcttgagctgaagtccctgaattcagcagtgaaagagccccggtgcatttcaccatta
gtgggagtgtacacaactcacacgtctatttcccagtcagagccatcaaagagtggccct
agttgttacaccacgggatcaaggctgtcctctccagctatgagaaccttcacgtcagag
agacttcccgctgattgtccacggcgcgtcctcaagccagtcaacgccgagatacgtgtg
tccccggccccgagcccacagctgtacacatctttctccaaactctccaggtctctgtcc
cccaaacctagctatgccttaaacctagacgccgagtcacagccgtgccacagtagcgct
tctcctgcgcggccacgctcaaatgctcaaccagcctctggctcagaaaatgacagcggc
gtctcacgtcatccctcagatgagccctcgccggtgacacactctcacaggctgtctcca
cttcccagaatccccccgctctcgttcctgcgccgcacccctaccccctgtctcctgccc
cccaagcctgactcctgcccccccaccccagaccgcttcaccctttccccctccccggca
accctcagccgcgacctcaccccgtcaccctccttcccgccctccttgacgccctcgccc
accctcaagggtcgcgtgtcagtctcagctgacagggaggataaaaaaagccagccatac
aagatcaagtcattttataaaacccttgcagccatccccacaaactccctcctgatggaa
cagcaggccattgacaatgaagtggacaagaatgagaattcagtggacccttcagagcaa
tttttaatggaggaggctagggccgagatgtgctcgcctgcccaactgcgggcccagtct
gaagagttgtatgccgccattgacgaggtccttgagagccctgtctcttttcggcgaccg
ctcctctcgccttcgcccacaatgcgctgggaagaaacagactcagcgaagagatacacg
ccaagatcttcaccaagaactgttggacgggaaactaaatatgcagcctaccatttgcaa
tcacttggcctgactgaacagcatgcgacgaagccaggagtgatacgtcccgcctctgta
acgtcaaggtttcccactgacagtgaagaggagagatactccccaaatcctttcaagact
tatctgaacaatcaccctggtaacaacccaaacaagtttgccagctcgcttgtgggagag
cctgaggcagacggtcggagacctctgagcagccagcccacggccaaaaacacctcttct
ggaggaatgaagttcagccttttaccccccactcttcggctaaccgcaacagaagaggct
ctctcggcacaggcgactgcaccatctccactcagcaccacactggctaagatggaggtg
catgaaactgacatttag
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