Clupea harengus (Atlantic herring): 105911700
Help
Entry
105911700 CDS
T09045
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105911700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
105911700
NCBI-ProteinID:
XP_012695985
Ensembl:
ENSCHAG00000024642
UniProt:
A0A6P3WDH0
LinkDB
All DBs
Position
21:complement(14586911..14592767)
Genome browser
AA seq
692 aa
AA seq
DB search
MLLWIVLLKAALCVAIGNVTRDVCKDQICSCNAIEGDLHIDCEKRSFSNLHHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FKKNTFLGLDDLEYLQADFNLLRDLDPSVFRDLSKLEVLILNDNLITALPTNVFQHVPIT
HLDLRGNRIKTLPYEGVLEQIPGIVEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGSVL
CEAPIILQGRDLNETSEADLCPSESGIDTGMVAPPTQEEISDPGPRPTPYKTGGDTESQT
PGNKGPLKSGENWQLKTKPTAMATGTGEKDQLSNASCPQSCSCKLIGTRQGLGVNCEGKK
IESVANLKPKPLMAHELNLRDNNIHTVKKNHLRGYISLNLLDLGGNNIKTLENGTFQNLT
ELRWLYMDKNYLDTLMAEMFVGLQNLEYLSLEYNDIQLIMAGTFNPMSNLRVLFLNNNLL
KSLPVDVFQGVALSKISLHNNYFTYLPVPGVLDQLNSIIQIDLHGNPWDCSCKIVPFKQW
AVKLGPDVIVSDLKCESPPESWARDFRHIKNELLCPRLKNNIFPTSLSKNSTFPVDTGTR
SNSYLEPSRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSSASEINSLQ
TVCDSSAYWHSGFNADAPHRNYDCGAHSLSDK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcttctttggattgtgttgctgaaggcggctctttgtgttgctattggaaatgttaca
agggacgtttgtaaggatcagatttgctcctgcaatgcaatagaaggcgatttgcacatt
gactgtgaaaagaggagctttagtaatctccatcatttgactggtccgagttcccagttt
taccatttattgctccatggaaattccttgtccagactgtttcccaacgagtttgctaac
ttttacaatgctgtcagcctacatttggagaacaacggcttgcacgacattgtccccggc
gcttttctcggactgcagcttgtcaaacggctgcacataaacaacaacaaaatacgatct
tttaaaaagaacacgttccttggtttagacgacctggaatatcttcaagctgattttaat
ctgctgagagaccttgatccatctgtgttcagggacttgagtaaacttgaagttttgatc
ctaaacgacaaccttataactgcacttcctacaaatgtgtttcaacatgtacccatcacg
cacctcgacctacgaggaaatcgaataaaaacgttgccttatgaaggagttctagaacaa
ataccaggcatagtagaggttttattggaggacaacccatgggactgtaactgcgatctg
gtgtctctgaaggaatggctggagaatatcccacagaacgctcttatcgggagtgtcctt
tgcgaggcaccgattatactgcagggaagggacttaaacgagacatcagaggcagacctg
tgcccttcagagagcgggatagacacgggcatggttgcaccgcccacccaagaagagatc
tccgatcctggaccccgtccaacgccatataaaaccggtggtgacacagaatctcaaact
ccgggaaataaggggcccctgaaatcaggcgaaaactggcagctgaaaacgaaacccact
gctatggcaacggggacaggggagaaggaccagctgtccaacgcatcctgtcctcagtca
tgcagctgcaaactgatcggcaccagacaaggactcggggtcaactgcgagggcaagaaa
atagaaagcgtggccaatttaaagcctaaaccccttatggcgcacgagctgaatctgcgc
gacaacaacatccacactgtgaaaaagaaccacctaagaggctacatcagtctcaattta
cttgatctggggggtaacaacatcaaaacgctagaaaatggcactttccaaaatctcact
gagttaaggtggctgtatatggacaaaaactacctggatacgttaatggcggaaatgttt
gtgggactgcagaatttggaatatctcagtttggaatacaatgacattcagctcatcatg
gcaggcactttcaatcccatgtcgaatttgagggtcctctttctcaacaacaatttgttg
aaatctctacctgtggatgtgtttcaaggggtggctttgtcaaaaatcagcctgcataac
aattatttcacatacctcccagtgcctggtgttttagatcagctcaactccattatacaa
attgatttgcatggaaacccatgggattgctcgtgtaaaattgttcctttcaaacagtgg
gcagttaagcttgggccagacgtcattgtaagtgatctaaaatgcgagtcccccccggag
tcttgggccagggattttcggcacattaaaaatgagctactctgtccacggctcaaaaac
aacatctttcccacctctctctccaaaaacagcactttccctgtagacacggggacacgg
tccaactcctatctggaacccagcagagtatccatctctgtactggtgcctggtttgctg
ctggtctttgtcacgtcggcattcactgttgtgggaatgctcgtctttatcttacggaac
cgtaaaagatcaaagcgaagagatggcaactcctcagcctcagagataaattctttacag
acagtatgcgacagttcagcttactggcatagtggattcaacgcagacgcaccgcatagg
aattacgactgtggcgctcactccctttctgacaagtaa
DBGET
integrated database retrieval system