Clupea harengus (Atlantic herring): 105911719
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Entry
105911719 CDS
T09045
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105911719 (pum3)
03009 Ribosome biogenesis [BR:
char03009
]
105911719 (pum3)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
105911719 (pum3)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105911719 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
RXT2_N
Motif
Other DBs
NCBI-GeneID:
105911719
NCBI-ProteinID:
XP_031414639
Ensembl:
ENSCHAG00000025596
UniProt:
A0A6P8ERM1
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All DBs
Position
21:16553283..16565139
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AA seq
736 aa
AA seq
DB search
MVRVTMDVKPKKKSFVHKDGKKSGEGGAMSGKPKGKGLGKPGKRPFKPFDAGKGKKFDGP
GKKFDGPRKKFDGPKKKFDGPKKKFDGPAKKFDGPAKKFDGPGKKFDGPRKKFDGPGKKF
DGPRKKFDGPGKKFDGPGKKFDGPGKKFDGPGKKFDGTGKNGPQKFIKKTPNDGKFSQKR
KFQPGKEGENGSEAKKPKWDEFKQQKKELKQNRQQLERKDTFHVISRAKQVWEAVRRKDC
DKDKRAKLMNELHDLVQGKIKSIAFAHDSTRVLQCFIQFGNEKQRQEVFDELKDSFVELS
KSKYARNIVKKFLMYGSKQQVGEVMLAFKGNVRTMLRHSEASSVVEYAYNDKAILPQRLM
LTEELYGNTFQVLKSTVCPTLDKVLEMNPGKIDGIMEEMKQILTPMSQKEAVVKHSLVHK
VFLDFFLHAPAKQRTEMIESIRESVVYMAHTHDGARVAMHCLWHGTPKDRKVIVKTLKTY
IDKFSVGEYAHLALLAAFDCIDDTKLVKQLIISEIIASLTEIISNKHGRKVLLYLLCPRD
PANLLPEIIQLLEKGDGNAYSKKDTAVRRQELLEAVSPTLLQHLTENARAMVTDKGSINA
VSDILGGTVGDLRPAMEAVADIASEEFVPGGVEGQLHMAEHPAGHLVLKWLIEQDSKMKE
SGREERFSRVLLEKVGLEKMKAWVAVNRGAIVLGCLLQSADDGVAEEVKQALKMIVPDLK
EIKNSKGVEALLEKLD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtaagagtcaccatggacgtaaagccaaaaaagaagtcatttgttcacaaggacggg
aaaaaatcaggagaaggtggtgctatgtcaggtaaacctaaaggaaaaggtttaggcaaa
ccaggaaagcgtcctttcaagccatttgacgccggtaaaggcaaaaagtttgatggacca
ggaaagaagtttgatggacccagaaagaagtttgatggacctaagaagaaatttgatgga
cctaagaagaaatttgatggacctgcaaaaaagtttgatggaccagcaaagaaatttgat
ggacccggaaagaagtttgatggacccagaaagaaattcgatggacccggaaagaagttt
gatggacccagaaagaaattcgatggacccggaaagaagttcgatggacccggaaagaag
tttgatggacccggaaagaagttcgatggacccggaaagaagtttgatggaacaggaaag
aatggtccacagaagttcattaagaagaccccaaatgatggaaaattctcccagaagaga
aagtttcaaccggggaaggagggtgaaaatggttcagaggcaaagaagcctaaatgggac
gagtttaaacagcagaagaaggaattgaagcagaatcgccagcagcttgagcggaaagac
acctttcacgtcattagtagagctaagcaggtgtgggaagcagttaggaggaaagactgt
gataaagacaaaagggccaaactgatgaacgagcttcatgacctcgtacaagggaagata
aaatctattgcctttgcacatgactcaacacgcgtgcttcagtgtttcatccagtttgga
aatgaaaagcagagacaagaagtgtttgatgaactcaaagattcctttgttgagttgagc
aaatcaaaatatgccagaaatattgttaagaaattcttaatgtatgggagcaagcagcag
gtgggggaggtgatgttggcctttaagggaaacgtgcggacgatgctgcgtcactcagag
gcctcgtccgtggtggagtatgcctacaacgacaaggccatccttccacagcgcctcatg
ctcaccgaggagctctacggaaacacattccaagtactcaagtcaacagtttgtcccacg
ctagacaaggttcttgaaatgaacccaggcaagatagacggcatcatggaggagatgaaa
cagattctcacacccatgtcacaaaaagaagctgttgtcaaacattccctggtccataaa
gtgttcctggatttcttcctccatgccccagccaaacaaagaacagagatgatcgagtcc
atcagggagtcggttgtgtacatggcccacacccatgacggggcacgggtggccatgcac
tgcctgtggcacgggacccccaaggataggaaagtcattgtcaaaaccctgaagacctac
atagacaaattttccgtgggggagtacgctcacctagcgctcctggctgccttcgactgc
atcgatgacaccaaactagtcaagcaacttatcatatcagagatcatcgcctccctcact
gaaatcatcagcaacaaacacggcaggaaggtgctgctgtatctgctctgcccgcgggac
cccgccaacctgctgcccgagatcatccagctgctggagaaaggagatgggaatgcatac
agtaagaaagacacagctgttaggcggcaggagctgctagaggccgtctccccaactctg
cttcagcacctgactgaaaatgcacgtgccatggtaacggacaagggctctatcaacgcc
gtgagtgacatcctgggcggaacggttggcgaccttcgacctgccatggaggcagttgcc
gacatcgcttctgaggagtttgtacctggtggagtggaaggacagctgcacatggctgag
catcctgcgggtcatctggtgctgaagtggctgatcgaacaggattccaagatgaaggaa
tcgggcagagaagagcgtttctcccgggtgttactggagaaggtgggtctggagaagatg
aaggcctgggtggcagtaaaccgtggagccatcgtgcttggctgccttctgcagagtgct
gatgatggagtggctgaagaagtcaaacaggccctgaagatgatcgtccctgatctcaag
gagatcaagaactctaaaggagtggaggcgctgttggagaagcttgactga
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