Clupea harengus (Atlantic herring): 105911733
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Entry
105911733 CDS
T09045
Symbol
arvcfa
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog
KO
K28154
splicing regulator ARVCF
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105911733 (arvcfa)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105911733 (arvcfa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Atx10homo_assoc
Radical_SAM_N
Motif
Other DBs
NCBI-GeneID:
105911733
NCBI-ProteinID:
XP_031414587
Ensembl:
ENSCHAG00000001619
UniProt:
A0A6P8EUM1
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Position
21:complement(17406167..17425671)
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AA seq
911 aa
AA seq
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MPAEVKEEHSSEDGSGAQGRQEPGEQPEEMAPIAEAPDTPTSLKSTATSSNGGTSHADTE
REDSSVTLTEKSSSPDTEMNPMSCSTSHEEVDQTQLEDTQTTETESAKPEEPCPQDTHNS
SIPKSPVDRDEPTHEPAATTNTNTTTDGNANTPGQNIFPPPPPSQTEPPPLPQAQPDPIP
KTPLGLGSIHESFIALNGGLPQPPATLTHLPANFLSSHTPVWPPRSYLPESCYTLPLPRD
LCARAAQSGLTESHAPNEGEQGGGDIKPEHPMDGHHTLGGTQFFRPPHDLIRDLPKMRGG
YDGMEALQLPYLQDLYRMHTLAAQKRGSLASLDGMRRDPRWRDPNLREVICMLGHPMDPV
KANAAAYLQHLCYENDQVKQEVRQLRGVPVLVGLLDHPKAEVHRKACGALRNISFGKDHL
NKVAIRNCDGIPALIRLLRKSSDMEVRELASGTLWNLSSHEPLKMQVINHGLQMLSNEII
IPHSGWGLEPSDPSKPRESDWTTVFKNTSGCLRNVSSDGAEARQRLRDCEGLVDALLHAL
QSAVARKDVNNKAVENCVCILRNLSYHVHKEVPGAERFKSQAANKIARSGGHLCKKEESA
KEEWFSQCKRHSLCDKKYSTLDMPKRPMAMKGLDLLYQPEVVRLYLSLLRLSQNQNTLEA
AGGALQNLSAGQWAWSNYIRATVRKEKGLPILVELLHSDGDKVVRAVAIALRNLAIDRRN
KDLIGSYAMRDLVSNLPSGQQHPAKNLEEDTVVAVLNTIQEIITDSAENARFLVQGQGIQ
KLVAINKTSQSGRETKAASHILQTVWAYKDLRNTLYKAGWNKSHFKPSASTLPKKVKNGK
AAYDDITLPLMEKNQDAYYSIDQSDRQSEVPSHMVEREQLQSVNEKRHFIRGNRPAVGLV
EQTPPPLDSWV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaggttaaagaggagcacagctcagaggatggctctggcgcccaggggagg
caggagcccggggagcagcctgaggagatggcccctattgcagaggctccggatactccc
acctccctcaagtccaccgccacctccagcaatggaggcaccagccacgcggacacggag
cgggaggacagctcagtcaccctcacagagaaatcctccagcccagacacggagatgaac
cccatgagctgcagcacctcccacgaggaggtggaccagacacagcttgaggacactcag
actacagagacagagtcagccaaaccagaggagccatgccctcaagacacccataactca
tccatcccaaagagcccagtggacagagatgaaccaacccatgagccggcagccaccaca
aacactaacacaaccacagatggcaacgccaacactccgggccaaaacatcttcccacct
ccgccgcccagtcagactgaacccccaccactcccacaagcgcaacccgaccccatcccc
aaaacccctcttgggctcggaagcatacacgagagcttcatcgccctcaacggcggctta
ccccagcctcctgccaccctgacccacctccccgccaacttcctgtcgtcacacacgccc
gtctggcccccgcggagctacctgcccgagagctgctacaccctgcccctcccccgcgac
ctctgcgcccgcgccgcccagagcgggctcactgagagccacgcccccaacgagggcgag
caggggggcggggacatcaagccggagcacccaatggacggccaccacaccctgggggga
acccagttcttcaggccaccccatgacctcatcagagatctccctaaaatgagaggaggg
tatgacggcatggaggccctccagctcccctacctgcaggacctctaccgcatgcacacg
ctagccgcccagaagcggggctccctggccagtctggacggcatgcggcgggacccgcgc
tggagggaccccaacctgcgggaggtcatctgcatgctgggccaccctatggacccggtg
aaggccaacgcggcagcctacctgcagcacctgtgctacgagaacgaccaggtgaagcag
gaggtgaggcagttaaggggcgtgccggtcctggtggggctcctagatcaccccaaggcc
gaggtccaccgcaaggcctgcggggcgctgcggaacatctcttttgggaaggaccacctg
aacaaagtggccatcaggaactgtgatgggattcctgctttgatccgcctgcttaggaag
tccagtgatatggaggtcagagagctagcctcaggcaccctgtggaacctctcttcccat
gagcctctgaagatgcaggtgataaaccatgggcttcagatgctcagcaatgagatcatc
atccctcactcgggctggggcttagagcccagtgacccatccaagccacgcgagtccgac
tggactactgtcttcaagaacacatctggatgcttaaggaacgtgagctcagacggagcg
gaggctcgacagcgcctgagggactgtgaggggcttgtcgacgctctgcttcacgccctt
cagtctgcagtggccaggaaggatgtgaacaacaaggctgtggagaactgtgtgtgcatc
ctgcgcaacctctcttatcacgtccacaaagaggtgccaggggcggagcgattcaagagc
caagcggccaataagatcgcgcgatcaggggggcatctgtgcaagaaagaggagtctgcc
aaagaggaatggttcagtcagtgcaaacgccacagcttgtgtgacaaaaaatacagcact
ctggacatgcccaagcgtcccatggcaatgaaaggtctggatctcctctatcagccggag
gtggtaagactctacctgtccctcctcagactaagtcagaaccagaacactctggaagcg
gccggtggagctctgcagaacctctcggctggacagtgggcttggtccaattatatccga
gcaacagtgcggaaagagaaaggtctgcccattctagtagagctactgcactcagacgga
gacaaagtggtcagagctgttgccatcgcgctgcgaaacctggccatcgatcgccggaat
aaagatttaattgggagttatgccatgcgggatctggtcagcaacttgccgagtggccag
cagcatcctgccaagaacctggaggaggacaccgtggtggctgtcctcaacaccatccag
gagatcatcactgacagcgcagagaatgctcgcttcctggtgcagggacagggcatccag
aaactggtcgccatcaacaaaacaagccaatctgggagggaaaccaaagcagcttctcat
attcttcagactgtttgggcctacaaagacctaaggaacacgctctacaaggctggttgg
aacaaatcacacttcaagccttcggcctccacccttccaaagaaggtgaagaatggaaag
gcagcctatgatgacatcacccttcctctgatggaaaaaaaccaagatgcgtattacagc
attgatcagagcgacaggcagagcgaggttccgagtcatatggtggaacgggaacagttg
cagagtgtcaatgagaaaagacacttcatcagagggaaccgaccagctgttgggctggtg
gaacaaactcccccacccctggattcatgggtctga
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