Clupea harengus (Atlantic herring): 105911763
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Entry
105911763 CDS
T09045
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00250
Alanine, aspartate and glutamate metabolism
char00410
beta-Alanine metabolism
char00430
Taurine and hypotaurine metabolism
char00650
Butanoate metabolism
char01100
Metabolic pathways
Module
char_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
105911763 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
105911763 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
105911763 (gad1b)
00430 Taurine and hypotaurine metabolism
105911763 (gad1b)
Enzymes [BR:
char01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
105911763 (gad1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
105911763
NCBI-ProteinID:
XP_012696048
Ensembl:
ENSCHAG00000012094
UniProt:
A0A6P3WDQ5
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Position
21:complement(13826917..13847270)
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AA seq
592 aa
AA seq
DB search
MAASAPSSSAGDPDPNSTNLLPPSTTYDAWCGVAHGCTRKLGMKICGFLQKNNSLEEKSR
IVNALKEQSSKNQQSCENSERDDAQFRRTETDFSNLFARDLLPAKNGEEPTLQFLLELVE
ILTNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRT
GHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFTLMEQLTLKKMREMVGWPGG
EGDGIFSPGGAISNMYSVMVARYKYFPEIKTKGMCAAPRLVLFTSEHSHYSITKAGAALG
FGKENVVLLRTDERGRVIPADLEAKIIDVKQKGHHPLFVNATAGTTVYGAFDPINEIADI
CEKHNLWLHVDGAWGGSLLMSRKHRHKLSGVERANSVTWNPHKMMGVPLQCSAILVREKG
VLAGCNSMCAGYLFQPDKQYDVTYDTGDQAIQCGRHVDIFKFWLMWKAKGTIGFEQHVDK
CLELSDYLYNKIKNREGYEMVFEGEPQHTNVCFWYIPPGMRGMPDGDERSERLHKVAPKI
KAMMMECGSTMVGYQPQGDKVNFFRMVVSNNAATRSDIDFLIDEIERFGTDL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcagcaccttcctcctccgctggcgacccggatcccaattcgactaattta
ctaccaccatccacaacctatgatgcgtggtgcggcgtagcacacggctgtacgaggaag
ctggggatgaagatatgcggcttcctgcaaaagaataacagcctggaggagaagagtcgt
atcgtcaatgccctcaaggagcaatcttccaaaaatcagcagagctgcgaaaacagcgaa
cgggatgatgcccaattcaggcgcactgaaacggacttctccaacctgtttgctcgggat
ctactgcccgccaaaaatggagaggagcccaccttgcagttcttgctggaactcgtggag
atcctcaccaactacgtgcgcaagaccttcgacaggtcaaccaaagtgctggacttccat
cacccgcaccagctgcttgagggaatggagggcttcaacctggaactctccgaccagccc
gagtcacttgaacagatccttgtggactgccgagacacactgaaatacggcgtgcgaaca
ggtcatcccagattctttaaccagctgtccactgggctggacatcatcgggttagctgga
gaatggctgacctccaccgcaaacaccaacatgtttacgtacgagattgctcctgtcttt
acactgatggagcaactcacactgaagaagatgagagagatggttggctggccaggtggc
gagggggatggtattttctcacctgggggcgccatatccaacatgtacagcgtgatggtt
gcacgttacaagtacttcccggagatcaaaactaaaggaatgtgtgccgcaccccgattg
gtcctcttcacctcagaacatagccactattccatcaccaaggctggagcagcgctggga
ttcggcaaggagaacgtcgttctgctgcgcacagatgagaggggccgagtcatccccgcc
gacctggaggccaagattatcgatgtcaagcagaagggtcatcatccactctttgtgaac
gccacggctgggaccacagtgtatggggcattcgaccccatcaacgagatcgctgacatc
tgcgagaagcacaacctttggctgcatgtggatggtgcctggggaggtagtctgctgatg
tccaggaagcaccgtcacaagctgagtggcgttgagagggccaactccgtcacatggaac
ccacacaagatgatgggcgtgccactgcagtgctctgccatcttggtcagggagaagggt
gtcctcgcaggctgtaactccatgtgcgctggataccttttccagcccgacaagcagtat
gacgtcacctatgacactggggaccaggccatccagtgcggccgccatgttgacatcttc
aagttctggctcatgtggaaggccaagggaacaatagggtttgagcagcacgtcgacaag
tgcttggagctctcggattacctctacaacaaaatcaagaaccgggagggatatgagatg
gtgttcgagggggagccccagcacacaaatgtctgtttctggtacattccacccggcatg
agaggcatgccagatggggatgagcgcagcgagaggcttcacaaggttgcacccaagatc
aaagccatgatgatggagtgtggcagcaccatggtgggctaccagccccagggcgacaaa
gtcaacttcttccgcatggtcgtctccaacaacgctgccaccaggtccgacatcgacttc
ctcatcgacgagatcgagaggtttggcactgacctgtga
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