Clupea harengus (Atlantic herring): 105911767
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Entry
105911767 CDS
T09045
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1 isoform X1
KO
K24993
paraspeckle component 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105911767 (pspc1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105911767 (pspc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
Aldedh
Motif
Other DBs
NCBI-GeneID:
105911767
NCBI-ProteinID:
XP_012696050
Ensembl:
ENSCHAG00000003763
UniProt:
A0A6P3WDK0
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Position
21:complement(10403332..10432496)
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AA seq
533 aa
AA seq
DB search
MANRNLKQVNIQNSASPKPPNQKRNTDSPAMDRRPNMEEGTQPHSVVSPGTENDGGESME
MTLDLKSFRRTGEKTFTQRCRLFVGNLPSDINEDDFKKLFAKYGEANEVFINRDRGFGFI
RLETRTLAEIAKAELDGTVMKNRPIRIRFATHGAALTVRNLSPVVSNELLEQAFAEFGPV
ERAIVQVDDRGRPTGKGFVEFANKPAARKALDRCNDGALLLTTSPRPVVVELTEQFDEED
GLPEKLLQKSAQYHKEREQPPRFAQPGTFEFEYSSRWKALDEMEKQQRDQVDRNIREARE
KLEAEMEAAKHEHQLMMMRQDLMRRQEELRRLEELRNQELQKRKQIEMRHEEERCRREAE
MMRHRDHDDMRRQQQQQQQQDGFKPNFMDSREQEMRMSEMGPRGGINMGDAYNSGAAAGG
NQAPSQMLGMGMPGRGGAIGPEGTPLMPDNGVMRNERYPQGGPPQMVPPMGGRPGVESPQ
QQQQQQQAVVGGAGAIGGVGVGVGVGVGGPGAFGRGSPVGGNFDGPNNKRRRF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgaaaccttaaacaggtaaacattcaaaacagtgcttccccaaaaccccca
aatcagaagcgcaacaccgattctccagcaatggaccgaaggccaaacatggaggaagga
acacaaccccattctgtggttagtccaggaactgaaaatgatggaggcgaatcgatggag
atgacgctggatttgaaaagctttcggaggactggagaaaaaacgttcacacagagatgc
cggttgttcgttggtaacctaccatccgacataaatgaagatgacttcaaaaaactattt
gcgaaatatggcgaggccaacgaagtattcatcaaccgagaccgaggttttggctttatt
cggctggaaacaaggactcttgcagaaatcgccaaggcagagttggacggtactgtgatg
aagaatcggcccattcgcatccgctttgcaactcatggtgctgctctgaccgtccgcaac
ctctctcctgtggtgtccaacgagttgctggagcaggccttcgccgagtttggcccagta
gagagggccattgtgcaggtagatgatcgtggccgaccgacggggaagggttttgttgag
tttgccaacaagcctgctgcaagaaaggcgctggaccgctgcaatgacggagcactgctt
cttaccacgtcacctcgcccagtagttgtggagttgacagaacagtttgatgaagaagat
ggccttcctgagaagttgttgcagaagtcagcccagtatcataaggagagagagcagcct
ccgcgttttgctcagcccggcacctttgagtttgagtactcgtcgcgctggaaggccctg
gacgagatggagaagcagcagcgggaccaggtggacaggaacatccgcgaggcccgcgag
aaactggaggctgagatggaggcagccaagcacgagcatcagcttatgatgatgagacaa
gatctcatgaggcgacaggaagaactccgtcgtttggaggaactaaggaaccaggagctg
cagaagcgcaaacaaattgaaatgagacatgaggaggagagatgcagacgagaggcggag
atgatgcgacaccgtgaccatgacgacatgcggcggcagcagcagcagcagcagcagcaa
gatggcttcaagcccaacttcatggacagcagggaacaggaaatgagaatgagtgaaatg
ggccctcgtggaggaattaatatgggagatgcttataactctggtgcagcagctggtggt
aaccaggctccctctcaaatgctgggtatggggatgccaggccggggtggagccattggc
cctgaggggacaccattgatgccagataatggagtgatgcgcaatgagagatacccccag
ggtgggcctcctcagatggtgccccccatgggtgggcgaccaggggtcgaatccccccag
cagcagcagcagcagcagcaagcagtggttggaggggctggggcaataggtggagttgga
gttggggtcggggtcggggttgggggaccaggtgcttttggcagaggaagcccagttgga
ggcaactttgacggccccaacaacaagcgccgtagattttaa
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