Clupea harengus (Atlantic herring): 105911794 Help Entry 105911794         CDS       T09045                                  Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism char  Clupea harengus (Atlantic herring) Pathway char03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     105911794  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:char01009]     105911794   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:char04515]     105911794 Protein phosphatases and associated proteins [BR:char01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      105911794 Cell adhesion molecules [BR:char04515]  Cadherins   Protocadherins    105911794 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Cadherin_4 CR_prot_dom_plant MAP17 Big_9 EphA2_TM Motif Other DBs NCBI-GeneID:  105911794 NCBI-ProteinID:  XP_031414080 Ensembl:  ENSCHAG00000017784 UniProt:  A0A6P8EPQ7 LinkDB All DBs Position 21:11199084..11422687 Genome browser AA seq 1235 aa AA seqDB search MDLKDFYLLTALVACFWLDPAIAQELIYPIREELQENVLIGNIPKDLNISHTNPTTGASA NLVYRLVSKAGDNPLLRVVSNTGEIFTTSNRIDREKLCPGSSYEESECAFEIEVVILPND YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL VNSQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGNPQKSSTAILQVT VTDVNDNRPVFKESQIEVHIPENSPIGTSVVGLQATDADVGANAEIRYMFGTQVSPATKR LFALNSTSGLITVQRPLDREETAIHKLSVMASDGSSSPARATVTINVTDVNDNPPNIDLR YIISPINGTVRLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRIEDENDNPPIFSQPVIELTVKEN NKRDLFLTTIIATDEDSGKNAEIVYQLGPNASFFDLDRKTGQLTASRVFDREDQERFLFT VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKFSTVGVITVTDADA GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAMDNGRPPCSSAAKV TINVIDVNDNVPIVLSPQSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIISGN NKGLFRIDPVTGNITLEEKPTVSDIGLHRLVVNISDLGYPRSLHTLVLVFLYVNDTVGNS SHIYELIRRKIETPIDRPIGDASETYQSGDYLTIMIAIVAGAMVVIVVIFVTILVRCRHA SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN GSISLPAELEEPSIGRFDWNTAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKAPLHTRQGTLTRTRTE LNPEYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVSSAPLLP SHPLPLVQAQEQFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD NCWMPPSLGSYQSPKSPVSTFAHEKDWSKDKLLNGHTLTRSWKKEGGRDQFGERKQFGSS EGHFNGSGHMADIPLASLKSYQPSCGPDSPKEQQL NT seq 3708 nt NT seq  +upstreamnt  +downstreamnt atggacttgaaggatttttatctgttgactgccctagtagcctgcttttggctggatcca gccatagcgcaagaacttatctatcccattcgagaggagttgcaagagaacgtacttatt ggaaacataccaaaggacttgaacatctcccacacaaacccgaccactggagccagcgct aatctggtttaccggctggtgtctaaagcaggggacaatcctctgctcagggtggtgagc aacacgggggagatcttcaccacctcgaaccgcatagacagggagaagctctgccccggc tcgtcctatgaggagagcgagtgtgcatttgagatcgaagtggtcatcctgccaaacgac tacttcaggctcatcaagatcaaaatcgtcgtcaaggacacaaatgacaacgcgccaatg ttcccgtcaccagtgatcaacatctccattccggagaacacgctgatcaacagtcgtttc gccatcccctccgccacggaccctgacaccggacccaacagcgttcacaagtacgagctg gtgaacagccagagtgccttcgggctggacatcgtggagacgccagagggggagaagtgg ccgcagctgatcgtgcagcagaatctagacagggaacaaaaggacacgtacgtcatgaaa atcaaagtggaagatggaggcaatccccagaagtccagcacagccatccttcaggtgaca gtaactgatgtcaatgacaaccgtccggtgttcaaggagagtcaaattgaggtccacatt ccggagaattcccctatcgggacctctgtggtcgggcttcaagccactgacgcagatgtc ggtgccaatgctgagataaggtatatgtttggcactcaggtgtccccagccactaaacga ctctttgcactgaattcaacctctggcctcataacagtgcagagaccacttgatcgcgag gagacagccattcataagctatctgtgatggcgagtgatggaagctcaagtccagccagg gctactgtgactatcaatgtgactgatgtcaatgacaacccccctaacattgacctcaga tacatcattagtcccatcaatggcactgttcggctgtcagagaaagaccctattaacaca aagattgccctcattactgtgtcagacaaagatacagacgtaaatggcaaagttatctgt ttcattgaaaaagacgttccatttcatctcaaagctgtctatgacaaccaatacttgctg gagacctctgctctgctagactatgaaggcaccaaggagtacaacttcaaaattgtggct tctgactcgggcaaaccgagcttaaaccagacagcactggtgagagtgagaatagaggat gaaaatgacaacccgcccatctttagccaacctgtcattgaactgactgtgaaggagaat aacaagcgggacctatttctcaccaccatcattgccactgatgaggacagtggtaaaaat gcagagattgtttaccagcttggtcccaatgcgtccttctttgacctggaccgtaaaaca ggtcagctgactgcgtccagggtgtttgaccgcgaggaccaggagcggtttctcttcacg gtgacggcgcgtgacaatgggacccctccgctgcagagccaggctgcggtcattgttact gttctggatgagaatgacaacagccccaaattcacccacaaccacttccagttctttgtc tcggagaacctgcccaagttcagcaccgtgggggtaatcacagtgacggacgcggatgct ggggagaatgcagcagtgtctctctccatcctcaatgacaatgagaacttcatcctcgac ccttacagtggagttataaagtccaatgtgtctttcgaccgtgagcagcagagctcgtac acgttcgacgtgagggctatggataacggtcgtcctccatgctcctcagctgccaaagtg accatcaacgtcatcgatgtcaacgacaatgtgcccatcgtgctgtcaccacagtccaac acctcattcaaactggtgcctctctcagccatcccaggatcagtggtggctgaggttttt gctgtggatggggatacaggcatgaacgcagagctcaaatacaccatcatcagtgggaat aacaaggggctgttccgaatcgatccagtgacgggaaacatcacgttagaggaaaagccc accgtctcagacatcggtcttcacaggctggtggtgaacatcagtgacctgggataccca aggtctctacacactctagtgttagttttcctctatgtgaatgacacagtagggaattcc agtcacatttatgagctcattcgacgtaaaatcgagacccctatcgaccgacccattggg gacgccagtgagacctaccaaagtggggactacctgacaatcatgatcgccattgtagcg ggagccatggtggtgatcgtggtcatcttcgtcaccatcctggtgcgctgtcggcacgcg tcgcgcttcaaggcggcccagcgtaagaaacagggtgccgagtggatgtcccccaacacg gaaaacaagcagaacaagaagaaaaagcgcaagaagaggaaatcacccaagagctcgctg ctgaactttgtcaccatcgaggaaaacaaaccggacgaccccgcgcacgagcccatcaac ggcagcatcagcctcccggccgagctcgaggagccgagcatcgggcgcttcgactggaac accgcccccaccaccaccttcaagcccagcagccccgacctggccaggcactacaagtcc gcctctccgcagtccgccttccacctcaaggcggacacgccggtgtcggtgaagaagcac cacgtcatccaggagctgccgctggacaacaccttcgtcggcggctgtgacacgctctcc aagcgctcctccacgagctcggaccacttcagtgcctcggaatgcagctcccaaggaggt ttcaagacaaaggcccccttgcacaccagacaggggacgttaacccgcacccgtaccgaa ctcaaccctgagtatctggacctccgctcccgggccgagctcaaccccgagtactggacc ccctgcacccccttatcgcaacgtcgtgtcacgtttcacctgcccgacggttcccaggaa agctgcagtgacagcggcctaggggaccatgagcccgtgagcagtgcccctctcctgccc tcacaccctctccctctggtgcaggcacaggagcagttctacgagcaggcctcccccgac aagaggaccgaagctgacggcaactccgaccccaactctgatggaccccttggaccacgc ggacttgtggaagccacagagatgtgcacccaggagtgcctggtcctcggccactctgac aactgctggatgcccccgagccttggctcctaccagtcacccaagtcccccgtctccacc tttgcccacgagaaggactggtccaaagacaagctgctcaatggccacaccttgacccgc agctggaaaaaagagggcggccgggaccagttcggcgagcgcaagcagttcggcagctcg gagggacacttcaacggcagcggacacatggcggacatcccactggccagcctgaagtcc taccagccctcctgtggccctgacagccctaaggaacagcaactataa

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