Clupea harengus (Atlantic herring): 105911847
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Entry
105911847 CDS
T09045
Name
(RefSeq) speckle-type POZ protein-like B
KO
K10523
speckle-type POZ protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105911847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105911847
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105911847
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
105911847
NCBI-ProteinID:
XP_012696154
Ensembl:
ENSCHAG00000022564
UniProt:
A0A6P3WDX2
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Position
21:13038336..13048174
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMTAGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNVLK
VPECQLSDDLGSLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHKMEESKKNR
VDISDVEPAVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNSHAADIMETAGWKAMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggtccccacgccccctcccccgggggagatgacagcaggacctgtggcagag
agctggtgctacacacaggtaaaagtggtgaagttctcctacatgtggaccatcaacaac
ttcagcttttgccgagaggagatgggcgaggtgctcaagagctccaccttctcatcaggc
cccaatgacaagatgaaatggtgtttgcgtgtgaaccctaaagggctggatgaggagagt
aaagactacctttcactgtatctactgctggtcagctgtcccaaaagtgaagtcagggcc
aagttcaagttctccttactgaacgccaaacgagaagagactaaagctatggaaagccaa
agagcataccgcttcgtccaaggcaaggactggggcttcaagaagttcatcaggagggac
ttcctcctagatgaggccaatgggctcctaccggacgacaagctcactctcttctgtgag
gtaagtgtggtgcaggattcggtgaacatctcgggacagtccaacacgaacgtgctgaag
gttccggaatgccagctgtcggatgacctgggcagcctctgggaggggtcaaggttcacc
gactgcagcctctttgtgggggggcaggaatttaaagcacacaaatctatcctagcagcc
aggtcaccagtattcaacgccatgtttgaacacaagatggaagaaagcaaaaagaaccgt
gtggacattagtgacgtggagcctgctgttttcaaagagatgatgggcttcatctacacg
gggaaggcccccaacctggagaagatggctgacaacttgctggctgcagcagacaagtac
gctctggagcgtctgaaggtcatgtgtgaggaggcgctgtgtaacagcctctcggtggag
aacgtggccgacatcctcatcctcgccgacctgcacagtgcggagcagctcaaagcacaa
gccatagacttcatcaacagatgtagtgtgttaaggcagctaggttgtaaagatgggaag
aactggaacaacagtcacgctgctgacatcatggagacagcgggctggaaggcgatgatc
cagtcgcacccccacttggtcgccgaagcgttccgtgctctggcgtccgcccagtgtccc
ccttttgggctccctcggaaacgactaaaacagtcctga
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