Clupea harengus (Atlantic herring): 105911863
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Entry
105911863 CDS
T09045
Symbol
ly75
Name
(RefSeq) lymphocyte antigen 75 isoform X1
KO
K06559
lymphocyte antigen 75
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
105911863 (ly75)
04090 CD molecules [BR:
char04090
]
105911863 (ly75)
04091 Lectins [BR:
char04091
]
105911863 (ly75)
Pattern recognition receptors [BR:
char04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
105911863 (ly75)
CD molecules [BR:
char04090
]
Proteins
105911863 (ly75)
Lectins [BR:
char04091
]
C-Type lectins
Others
105911863 (ly75)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
UL45
ATE_N
Motif
Other DBs
NCBI-GeneID:
105911863
NCBI-ProteinID:
XP_031414808
Ensembl:
ENSCHAG00000009732
UniProt:
A0A6P8EFN3
LinkDB
All DBs
Position
21:10680653..10710230
Genome browser
AA seq
1729 aa
AA seq
DB search
MSWNIQAKVFTVVFTAFLSGHSSSFGYCAPSGNLDDDAFTIQHVNTSQCLGVSAEAQSLS
LANCTTSVGPGVLWKWGSSHRLFHVGSSRCLGLEVHTKTLALSDCDSKGTMLKWLCVGQA
IYTDYEMGLTRGAGAAVVAKRKPADAWRRGGSEENICQQPYKTIHTKDGNALGSPCVFPF
RYNGTWHHRCLPGQPDLENLPEKLSWCSSTMNFEQQRKWGFCLQNVEGCHTLWESSTNGH
CYQTVATAAVTWHQARDSCRSQGGDLLSVSSVAELKALEAMDLPDKLWIGLNQMDWAEGW
QWSDGSPLYVVNWAPEMPTPVGLGELDCGVLTSSKDGYKKNYENAMCERKLPYICKKSNS
TKPTERTVYKSTVCEDGWFPWDGRCLKHFMDAMTQSHAQESCTSNNASLLSIHSLEDMLM
FNVKLPSVGVDMWTGLKGNGIPLVFEWQDDSNVTYTHWAKGSPHIEQRTPLPTCVRFTGE
NHEWVLTDCNVKLTYLCAKKGVVNTSVHNEGCLEEGWRRHGNACYKIELKPVSFKQSCNL
TINDRFEQVFINRLLREHLSSYTQYVWTGLQDIKGNGEFSWTNGENVTFTNWGYGEPGSG
GGCAVMSTSRPLGKWLTRNCSLFEAGTICKKYLTPLKPPPKLNLTAPCPNGWFSKEGIPY
CYKVFHEERLTRTRTWTEAEGFCHSLGAHLPSFGNVDEMTALHYVMRDVISDDRYFWVGM
NRRNPNNDNAWEWSDGRPMSTSIFPMEVHEDDEYNRDCTAFKSLRGSFHLLFFFLLHDLP
PRPFYATPFHCDAQLEWACQIPRGTTPLQPIWYNPGGHHDTSVFVDGQEFWFVTSPWLSY
EEASLYCSSNNSRLAVPVNINSAKTMQEQILKHSPDIKTTWWADLKEPGPYVPLPFTQLH
FYHSSFLGRCPSLSQDSMIPDYKKLCSEKLPFVCEVLNVTATEKQPIGPHPPGLPCDGGS
IAFRDKCYTVIRPVVTTFKKASEICQAHRAQLITIRDQVEQDFINTLQPSLLLRTWIGLK
LKSQDMQWEDNTPVTYLNFHPLVHGQYRRIHVNGPEALELCAYIFSDPDSDILGTWDYTS
CSDFQNISICQHDADKPEVAVISDQPFQVRNHTYHLVPGVNMTWFDALEMCKEKDMELAS
VADAFQQAVLTVNVSRLGKPLWIGLFSEDDGEHYRWTDHSHTVFSRWSKESTTGRCVYLD
TDGFWKATDCGQGLSGAICHIPHEVIITPEHASMKCPHKGNGPNWFPYKNNCYTFQMLHS
RWDHYDNGQIQKTCQELDPKAALLTIRDEEENEYLRKKLLPLKSLAQFVWLGLHKDNNTK
QLKWYDETYVQYSNWKGGRPEVEGEFLAGLSLDGRWDLFSDDQYFTIFKQRTVVACKIEQ
NDREEFQKSPWDVTKYANHSYRVEGRKLTWFQAQEECARGGGHLASILSAAQSKELLAMA
KRDGFPLWIGLSNQAGNSSAYEWSDGSTFDYTPAGFHRGAVEDGCVFMDTSGMWVSISCQ
DKMEGALCYNSTVERAKPQKAPVSHRCPKTKGVSQWVEHGDHCYAFDMTFYNYTVFNLTY
AKRVCEQLDSSAHLLSIKSEVENDFVSKYVSSNPHITSRVWLGIGFTQDTSGFKWMDDSK
VDFSKWSSVPRETRTFPPPDICAVMLTNEDGFWNQTSCLESRGRIVCKIPMRSGGMSPAT
IFCIIVIPALLGIALYILYKKNRHHFFSAVRYQRSFDDVDSTSIINDTE
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaacatacaagctaaagtattcactgtggtattcactgcgtttcttagtgga
catagcagttcttttggatattgtgcaccaagtgggaatttagacgacgatgctttcacc
atccagcatgtgaacactagtcagtgtctcggggttagtgcggaagcacagtccctcagt
ctggccaactgcaccacgtcagtgggcccaggcgtgctgtggaagtggggctccagccac
cggctcttccatgtgggctcgtcgcgttgcctgggcctggaggtgcacaccaagacgctg
gccctgtccgactgcgactccaaggggaccatgctcaagtggctgtgcgtgggccaggcc
atctacaccgactacgagatgggcctgacgcgtggcgctggggcggccgttgtggccaag
cggaagcctgccgatgcctggagacgaggaggctcggaggagaacatctgccagcagcca
tacaagacaatacatactaaagatggcaatgctttgggttctccctgtgtctttccattc
cgctataacggaacttggcaccatcgctgcctcccgggacaacctgacctagagaatctt
ccggagaaattgagctggtgctcctccaccatgaacttcgagcagcagaggaagtggggc
ttctgcctccagaatgtggaaggctgccacactctctgggagagctccacgaatggacac
tgctaccagactgttgctacggcagctgtcacctggcatcaggcgagggactcgtgccga
agtcaggggggagacctgctgagtgtgtccagtgtggcagagctgaaagccttggaggca
atggacctccctgacaagctgtggatcggactgaaccaaatggactgggcagaggggtgg
cagtggtctgacggatctccactgtatgtggtaaattgggcaccagaaatgcccacccca
gtcggcctgggcgagttggactgtggcgtgttgacttcttctaaggatggatataagaag
aactatgagaatgccatgtgcgagagaaagctgccgtacatctgcaagaagtccaacagc
accaagcctacagagaggacggtgtacaagtccacagtgtgtgaggacggctggttcccg
tgggacggccgctgtctcaagcatttcatggatgccatgacccagtcccatgctcaggag
tcctgtaccagcaacaacgccagcctgctcagcatccacagcctggaggacatgctcatg
ttcaatgtcaaactcccatcagtaggtgtagatatgtggacaggtttaaagggcaatggc
atccctctggtcttcgagtggcaggatgactctaacgtcacgtacacacactgggccaaa
ggcagcccacacattgagcaaagaaccccattgccaacctgcgtacgcttcactggcgag
aaccatgagtgggtgctgacggattgtaacgtgaaactgacgtacctgtgcgcaaagaag
ggagtggtgaacacgagtgtgcacaatgagggctgtcttgaggagggctggagaagacat
ggtaatgcctgctacaagattgaactcaaacccgtttccttcaagcagagctgcaatctc
accatcaatgacaggtttgagcaggtcttcattaaccggctcctgagggaacacctgagc
tcttatacccagtacgtctggacgggcctgcaggacattaagggcaacggggagttcagc
tggaccaacggagagaacgtcaccttcaccaactgggggtatggagaaccaggcagtggc
ggtggctgtgccgtgatgtccaccagcaggccacttgggaagtggttgactaggaactgc
agtctgtttgaggcgggcaccatctgtaagaaatacctgacgcccctgaagccaccaccc
aagctgaacctcacagcaccctgccccaatgggtggttctccaaagaaggcataccctac
tgctacaaggtgtttcatgaggagcgtttgactaggacgcgcacgtggacagaggcggag
ggattctgccactcactgggagctcatctgcccagctttggaaacgtggacgagatgacc
gcactacactatgtcatgagggacgtcatcagtgatgaccggtacttctgggtcgggatg
aaccgcaggaacccaaacaatgacaatgcctgggagtggagcgatggcaggccgatgtct
acttccatcttcccaatggaagttcatgaggatgacgagtataatcgtgactgcactgcc
ttcaagtcgttgcgtggcagcttccaccttctgttcttcttcctgctgcatgacctcccg
ccccggcccttctacgccacgcccttccactgcgacgcccagctggagtgggcctgtcag
atccccagaggtaccactccattgcagccgatttggtataacccagggggccaccatgac
acatcagtgtttgtcgacggacaggagttctggtttgtgacctcaccctggctttcgtac
gaggaggcgagcttgtactgctccagcaacaacagccgcctggccgtgcccgtcaacatc
aactcagccaagaccatgcaggagcaaatcctaaagcattctccagatataaagacaact
tggtgggctgacctgaaggaaccagggccctatgtaccgctaccattcacgcagttacac
ttttatcactcatcgtttttgggccggtgtccatcactcagtcaggattcaatgatccca
gactacaaaaagctttgctcagagaagctgccgtttgtgtgtgaggtgctgaacgtgacc
gcaacagagaagcagccaatagggccacaccctccaggcctgccctgtgacggaggctcc
attgccttcagagacaagtgctacactgtgatcaggcctgtggtcaccacctttaagaag
gccagtgagatctgtcaagcccacagagcccagctcatcaccatcagagaccaggtggag
caagacttcatcaacaccctccagccctccctcctcctgaggacgtggatcggcctcaag
ctcaagtcccaagatatgcagtgggaggacaacacgcccgtcacctacctcaacttccac
ccactggtgcacgggcagtaccggcgcatacacgtcaatggcccagaggccttggagctg
tgtgcctacatattcagtgatccagactcagacatcctgggcacctgggactacacgtcc
tgctctgacttccagaacatctccatctgccagcacgatgcagataagcctgaggttgcc
gtcatctctgaccagcctttccaggtgcgcaaccacacctatcacctggtgccgggggtg
aacatgacgtggtttgatgcgctggagatgtgcaaggaaaaggacatggagctggccagc
gtggccgacgcattccagcaggcggtgctgacggtcaacgtgagccggcttggcaagccc
ctctggatcggcctattcagtgaggatgatggggagcactaccgctggacggaccacagt
cacacggtgttcagccgctggtccaaagagagcaccaccgggcgctgcgtctatctggac
acagacggcttctggaaggccaccgactgtgggcagggcctgagcggagctatctgccac
atcccccatgaggtcatcatcactccagagcacgcgtccatgaaatgccctcacaagggg
aatggccccaactggttcccctacaagaacaactgctacaccttccagatgctgcactcc
aggtgggaccactatgacaacggccagatccagaagacctgccaggagctggacccaaag
gcggcgctgttgaccatcagggacgaggaggagaatgagtatctgaggaagaagctcctg
cccctgaagtccttggcccagtttgtgtggctggggctgcacaaagataataacaccaag
cagctgaagtggtatgacgagacgtatgtgcagtactcaaactggaagggtggccgacca
gaggtggagggagagttccttgctggcctcagcctggacgggcgttgggatcttttctcc
gatgaccagtacttcacgatcttcaagcaaaggactgtggttgcctgcaagattgagcaa
aatgaccgggaagagttccagaagtctccgtgggatgtgacaaagtatgccaaccacagc
taccgtgtggagggccgcaaactcacctggtttcaagcccaggaggagtgtgcacggggc
ggtggccatcttgccagcattctcagcgccgcccagagtaaagagttgctggccatggcc
aaaagggatgggttccccctctggatcggcctgtccaatcaggctggtaatagttctgcc
tatgagtggtcggacgggtctacgtttgactacaccccggcgggctttcacagaggggct
gtggaggacggctgtgtgttcatggacacctccgggatgtgggtgagcatcagctgccag
gacaagatggagggggccctctgctacaacagcaccgtagagcgagcaaaacctcagaaa
gccccagtgtcccaccgctgccccaagacgaaaggagtctctcagtgggtggagcatggg
gaccactgctacgcctttgacatgaccttctacaactacaccgtcttcaacctcacctac
gccaagagagtgtgtgagcagctggattcatcagcgcacctgctcagcatcaaaagcgag
gtggagaacgattttgtctccaagtatgtcagcagcaacccccacatcaccagccgcgtg
tggctcggcatcgggttcacccaagacacctctgggtttaagtggatggatgacagcaag
gtggacttctccaagtggagctccgtcccacgtgaaacgagaacatttcccccacctgac
atctgcgcagtcatgttgaccaatgaggacggcttctggaatcagaccagctgcttggaa
agccgtggtcgcatcgtctgcaagatcccaatgcggtcaggtggcatgtcaccagctaca
atcttctgcatcatcgtgatcccagccctgttaggcattgcactctacattctctacaag
aagaaccgtcaccacttctttagcgccgtccgctaccagcgcagctttgacgatgtcgac
agcacaagcatcatcaatgacacggagtaa
DBGET
integrated database retrieval system
