Clupea harengus (Atlantic herring): 105911908
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Entry
105911908 CDS
T09045
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105911908 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105911908 (rbm26)
03041 Spliceosome [BR:
char03041
]
105911908 (rbm26)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105911908 (rbm26)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105911908 (rbm26)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105911908 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Nup35_RRM_2
RRM_1
RRM_Nup35
zf-CCCH
zf_CCCH_4
eIF_4EBP
Motif
Other DBs
NCBI-GeneID:
105911908
NCBI-ProteinID:
XP_012696247
Ensembl:
ENSCHAG00000015953
UniProt:
A0A6P3WE04
LinkDB
All DBs
Position
21:10931509..10947159
Genome browser
AA seq
1014 aa
AA seq
DB search
MIIENLDALKTWLSKTLEPICDADPSALAKYVVALVKKDKSEKELKALCNDQLDVFLQKE
TQIFVDKLFEALNSKSYLPQLVPEQPASTSRPADSHQRTDKDEPRKEEPSREEDRDKKFS
RRVNHSPQPSRYSRDSRRVDDRKKDDRTRKREYERNPPRRDSYRDRYNRRRGRSRSYSRS
RSRSKERPRDRDRERDRDRERDRDRTCSRSRSRSPGRSRERDSGKSKYEHDRVDRPEGGP
PDAYSNPPLLPAPSSTHFPVPTLSSTITVIAPAHHGNNVTETWSDFPPDHQLDHPPYPRG
PPPPQRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPSIPLFQPPPDGPPPPGLPP
PPPLLPPVNLRPPVPPPGTMPPSLPPVAGPPPPLPALQPSGMDGPPNSVTSSVPTIVTSG
VRPPITQPPPPLFTPDSFEPDGYNPEAPSMSGSRPIFRHRGNAQRPNLIGLTMGGVDLPP
RDKMSNSNNMRIVLESDSRKRLGGPHDGLGPVKKPWQENMHRPSYIHKPNHQGFHNKNPF
SLANTKLDVRLIPPELNNISKLNEHFSKFGTIVNLQVAYRNDPEAALIQFSTYEEAKRTM
LSTEAILNNRFIKVNWHRDDLPQTHTSQNMQKGIQPSQDPPGTTLKQSVKDRLGPLPAGN
AELPQDPSNASQNASKLSVKERLGFPPKPVAPGGQVFSTSTGLTKTVYNPAALKTVHKGA
FMGTASPEEALKRKQEAFKLQQDVRKKKQEILEKHIEAQKLLISKLERNKTMKAEDKVQI
MVTLTTLTGSITKLQEEIKGLSSPGLLKGIKSKAQAQKELLDTEMDLYKKTQAGEDTAQL
KIKYTQLQLEAAKRGLLAPGRGRGAHVRGRGGMRGRGRGMRGRGRGAQSMHTAVDHRPRS
LDISGFSDADRVELLPHFAQFGDIEDCQMEDSSQNAIITYRTRCEAELAAMHGVRFNNQQ
LRLSWHKPPVPLTSCDLEEAEPEEEEFQEDSLVDDALLQDDDEDDDHESRPWRR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattattgaaaacctcgatgccttgaagacgtggctctccaaaacgcttgaacccata
tgtgatgcagacccatctgcccttgccaagtatgttgtcgccttggtaaagaaagataag
tcggagaaggaattgaaagcactatgcaacgaccagttggatgtatttctacagaaagag
acccaaatattcgtggataaacttttcgaagctttgaattcaaagagttatctacctcag
cttgtccccgagcagcctgcctctacgagccgcccagccgactcgcaccagcgcacagac
aaggatgagccaagaaaggaagagcccagtcgtgaggaggaccgagataaaaagttctcc
aggagggtgaaccacagcccccagcccagtcgctacagtcgggacagcaggagagttgac
gaccgtaagaaggatgaccgcactcggaagcgcgagtacgagcgtaacccgcccaggcgc
gactcgtaccgcgaccgttacaaccgccgacggggccgcagccgctcttacagccgcagc
cggagtcgcagcaaagagcgcccccgtgaccgagaccgcgagcgggaccgtgaccgtgag
agagaccgcgatcgcacgtgcagccgctcacgatctagaagccctggccgcagcagagag
agggattctgggaagagcaagtacgagcatgaccgggtagaccggccagaaggagggcca
cctgatgcttactcaaacccgcccctccttcctgccccctcctccacccatttccccgtc
cccacgctcagcagcaccatcacagtcatcgcccccgcccaccacggcaacaacgtcaca
gaaacctggtctgacttccctccagaccaccagctggaccacccgccctaccccagagga
cctccgcctccacagaggaaacgctgccgtgactatgatgagaagggcttctgcatgcga
ggtgacatgtgtccttttgaccatggcagtgaccctgtggtagtggaggacgtcaacctt
cccagcatccccctcttccagccacccccggacggcccacctccccccggcctgccacct
cccccgcccctgctgccacctgtcaacctcaggccgcctgtgccccctccaggcaccatg
ccccccagcctccctccagtcgcaggtcccccaccccctctcccagcactgcagccctcg
ggcatggatggaccccccaattccgttaccagctcagtgcccaccattgttacatcaggg
gtgagaccccccatcacacagccccctccccctctcttcacccctgactcctttgagcca
gatggatacaatccagaggctcccagcatgagtggcagcaggcccatcttccgtcaccgt
ggcaacgcacagagacctaacctgattggcttgacgatgggaggggtggaccttccgcca
cgagacaagatgtccaacagcaacaacatgcgcattgttctggagtcggactccaggaag
aggttaggtggaccccacgatggactggggccagtcaagaaaccctggcaagaaaacatg
cacaggccgagctacatacataagcccaatcaccagggcttccataacaagaatcccttc
agcctggccaacaccaaactggacgtccgcctgatcccgccggagctcaacaacatcagc
aaactcaatgagcacttcagcaaatttggcaccattgttaacctgcaggtggcctatagg
aatgacccagaggcggctctgatccagttctccacctatgaggaggccaaacggaccatg
ctgagcactgaggccatcctcaacaaccgcttcatcaaagtcaactggcacagagacgac
ctcccacagacacacacttcccaaaacatgcagaagggcatccagccttcccaggatcct
ccagggacgaccctgaagcagtcggtcaaggaccgcctgggcccgctgcccgccggcaac
gctgagctgccacaggaccccagcaacgcctcacagaatgcttcaaagttgtctgtaaag
gaaaggctagggtttccccctaaacctgtggctccaggaggacaggtcttctctacgtct
acggggctgacaaagacggtttacaacccagcagcactcaaaacagtccacaagggggcg
ttcatgggcacagccagtcctgaggaagcactgaaaagaaagcaggaagccttcaagctg
cagcaggacgtgaggaagaagaagcaagagatcctggagaagcacatcgaggcccagaag
ctgctgatctccaagctggagaggaataaaaccatgaaggcggaggacaaggtccagatc
atggtcactctgaccactctaacagggagcatcaccaaacttcaggaggagatcaaaggc
ctctccagtcccggcttgctcaaggggatcaagagcaaagcacaggcacagaaggagctc
ctggacacagaaatggacctctacaagaagacccaggctggagaggatacggcccagctg
aagatcaaatacacacagctccaacttgaggcagccaagcgggggctcctggctccaggg
cggggcagaggggctcatgtgaggggccgtgggggcatgaggggtaggggccgtgggatg
aggggccgggggcgtggggcccagtctatgcatacagcggtggaccaccggccccgctcg
ctggacatcagcggcttcagcgacgcagaccgcgtagagctgctgccacactttgcacaa
tttggggatattgaggactgccagatggaagactccagccagaatgccatcattacctac
aggacacgttgtgaagcagagctggcggcaatgcatggtgtgaggtttaacaaccagcag
ctgcgtctgtcatggcacaagccgcccgtgccgctcacctcctgtgaccttgaggaggct
gagcccgaggaggaggagttccaggaggactcgctggtggacgacgcgctgctgcaggac
gacgatgaagacgacgatcacgagtcacgcccgtggaggagatga
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