Clupea harengus (Atlantic herring): 105911976
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Entry
105911976 CDS
T09045
Name
(RefSeq) bile salt export pump-like
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105911976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105911976
04147 Exosome [BR:
char04147
]
105911976
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
105911976
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105911976
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Rad17
Motif
Other DBs
NCBI-GeneID:
105911976
NCBI-ProteinID:
XP_031414406
Ensembl:
ENSCHAG00000001238
UniProt:
A0A6P8EPZ6
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Position
21:complement(19446643..19461246)
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AA seq
887 aa
AA seq
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LTLCFCDHGNAQCSPPPRVSLLPPPQVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTI
AENIRYGRPGVNSEDIIKAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARA
LVRNPRILLLDMATSALDNESEAVVQEALDKVRMGRTTISIAHRLSTIKNADVIVGFEHG
RAVERGKHDELLERKGVYFTLVTLQSQGDKALNEKARKMAEGENAGKMDEDSERKSLTRA
GSYRASLRASIRQRTKSQLSNVIPESSVAIAGELGPRSYSQSYSASGAKDKSAVPEEEEE
RVEPAPVTRILKYNAPEWPYMLFGSIGAAINGGVNPVYSLLFSQILATFTMPDPIEQRNA
INGICMFFVLVGLTSFFTQMLQGYAFSKSGELLTRRLRRMGFKAMLGQDVGWFDDHKNSP
GALTTRLATDASQVQGATGSQIGMIVNSMTNIGVAIIISFYFSWKLSLVIMGFLPFLALS
GGFQAKMLTGFAKQDKEAMEIAGQISGEALNNIRTIAGLGKERKFVEMYEAQLEGPYQAA
LKKANVYGACYGFAQCIVFLANSASYRFGGYLVRQEGLHFSMVFRVISAIVTSGTALGRA
SSYTPDYAKAKIAAARFFHLLDRVPKISVYSDEGQKWSDFRGNLEFIDCKFTYPTRPDIQ
VLNGLTVSVKPGQTLAFVGSSGCGKSTSIQLLERFYDPDHGRVLIDGHDSTKVNVAFLRS
KIGIVSQEPILFDCSIAENIRYGDNQRDISMNDIISAAKKAQLHDFVMGLPEKYDTNVGS
QGSQLSRGQKQRIAIARAVIRDPNILLLDEATSALDTESEKTVQEALDKAREGRTCIVIA
HRLSTIQNSDIIAVMARGYVIEQGNHEQLMAKKGAYYKLVTTGAPIS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ctaactctgtgtttttgtgaccatggaaacgctcaatgctcacctcccccacgtgtctcc
ctcctccctcctccccaggtgacgctggacggtcacgacatccgcggcctgaacatccag
tggctgcgctccctcatcgggatcgtggagcaggagccggtgctgttcgccaccaccatc
gccgagaacatacgctacggccgccccggcgtcaactccgaggacatcatcaaggccgcc
aaggaggccaacgcttacaacttcatcatggacctgccgcagaaatttgacacgctggtc
ggagagggcggaggtcagatgagtggcggtcagaagcagcgtatcgccatcgcccgcgcc
ctcgtccgcaatcccagaatcctcctgctggacatggccacctctgctctggacaacgag
agcgaggctgtggtgcaggaggctctggacaaggtgcgtatgggccgcaccaccatctcc
atcgcccaccgcctgtcgacgattaagaatgcggacgtgatcgtgggctttgagcacggg
cgcgccgtggagcggggcaaacacgacgagctgctggagaggaagggcgtatacttcacc
ctggtcacgcttcagagccagggggacaaggcgctcaacgagaaagcacgcaagatggct
gagggagaaaacgccggaaagatggatgaagactccgagaggaaaagccttactagagca
ggaagttatcgtgcaagcttgcgagcttctattcgccaaagaacaaagtctcagctgtct
aatgtcattccggaatcttctgtggccatagctggagagttaggccccaggtcttactca
cagtcatactctgccagtggtgccaaggacaagagtgcagtgcctgaagaggaggaagag
cgggtggagccggccccggtgacgcggatcctgaagtataacgctcctgagtggccctac
atgttgttcggctccatcggggccgccatcaacggcggcgtcaaccctgtgtactctctg
ctcttcagtcagatcttggcgactttcaccatgcctgaccccatagagcagcgtaacgcc
atcaatggcatctgcatgttctttgtgctggttggactcacctcgttctttacccagatg
ctgcagggctatgcgttctctaagtccggtgagctgctgacccgtaggctgcggcggatg
ggtttcaaggccatgctgggccaggacgtgggctggtttgacgaccacaagaacagcccc
ggggcgctaaccacccgcctggccaccgacgcctcacaggtccagggggcgacaggctct
cagattggcatgatcgtgaactctatgacgaacatcggcgtggccatcatcatctccttc
tacttcagctggaagctgtcgctggtcatcatgggcttcctgcccttcctggcgctctcc
gggggcttccaggccaagatgctcaccggcttcgccaagcaggacaaggaggccatggag
atcgcaggacagatctcgggcgaggccctgaacaacatccgcaccatcgcagggctgggc
aaggaacgcaaattcgtggagatgtacgaggcccagctggaggggccgtaccaagccgca
ctcaagaaggctaacgtctacggcgcctgctacggcttcgcccagtgcatcgtcttcttg
gccaactccgcctcctacaggttcggagggtacctggtcaggcaggagggactccacttc
agcatggtcttcagggtgatctctgccatagtgacaagtggcacggctttgggcagagcc
tcatcctacacccctgactacgccaaggccaagatcgctgctgcccgcttcttccatctc
ctggaccgcgtgcccaagatcagtgtctacagcgatgagggccagaaatggagtgacttt
cgaggcaacctggagttcattgactgtaagttcacgtacccgactcgtccagacatccag
gtgctcaacggcctgaccgtgagtgtaaagcctggacagacgctggccttcgtgggcagc
agcggttgtggcaagagcaccagcatccagttgctggagcgcttctacgacccagaccat
ggcagagtgctaattgacgggcacgactcgaccaaagtgaacgtagccttcctgcgctcc
aagatcggcatcgtgtcgcaggagcccatcctgtttgactgcagcatcgccgagaacatc
cgctatggtgacaaccagcgcgacatcagcatgaacgacatcatctctgccgccaagaag
gcgcagctgcacgacttcgtcatgggcctacctgagaagtacgacactaacgtgggctcc
cagggttcccagctgtctcggggacagaagcagcgcatcgccatcgccagagccgtcata
cgcgaccccaacatcctgctgctggacgaggccacctcagcgctcgacacagagagtgag
aagacggtacaagaggccctggataaggctcgtgaggggcgaacctgcatcgtcatcgct
caccgtctctccaccatccagaactctgacatcatcgccgtgatggcacgtggctacgtc
attgagcagggcaaccacgagcagctcatggccaagaagggagcctactacaaactggtc
accacaggggcccctatcagctaa
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