Clupea harengus (Atlantic herring): 105911983 Help Entry 105911983         CDS       T09045                                  Symbol gli3 Name (RefSeq) transcriptional activator GLI3   KO K06230   zinc finger protein GLI3 Organism char  Clupea harengus (Atlantic herring) Pathway char04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     105911983 (gli3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:char03000]     105911983 (gli3) Transcription factors [BR:char03000]  Eukaryotic type   Zinc finger    Cys2His2 GLI-like     105911983 (gli3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-C2H2_15 zf-H2C2_2 zf-C2H2 FOXP-CC zf-C2H2_4 Zap1_zf1 Pinin_SDK_N Motif Other DBs NCBI-GeneID:  105911983 NCBI-ProteinID:  XP_031439432 Ensembl:  ENSCHAG00000007956 UniProt:  A0A6P8GV95 LinkDB All DBs Position 17:complement(14879999..15009803) Genome browser AA seq 1672 aa AA seqDB search METQSQASSAAEKKKRVETIVATKSASVRSDISEKAVASSTTSNEDESSVPTYHHRERRN ALSAHNPAAGTASGKLSEEPSTSTEERPHLVKKELHSSLPHLADHALPYRGTLFAMDPRN GYLDHPYAPPQFFPAFHPPVPIDDRHTQGRYIYEHSPVPPLHVPPVLAGSPAFSDISLIR ISPHRNPSVGADSPFNPPHPYINPYMEYIRSLPGSPSLSMISAARGLSPADAPHTGLTTA EYYHHMALLAGHRSPYADIIPSVASTAGAGSNALHMDYLQAVEGSRFSSPRVPQRPRKRA LPISPLSDPGFDLQTMIRTSPNSLVTILNNSRSSSSTSGSYGHLSAGAISPALSFAYPPT PVALQMHQQLIGRQPGLVSSAFGHSPPLIHPSPAFATQRPVPGIPSAGLAPSERSVASSE AQSKPTSESAVSSTGDPMMHHKRSKLKPDEEPPSPGAGSVQEQPDGMTLVKEEGDKDEGK QEPEVVYETNCHWEGCCREFDTQEQLVHHINNDHIHGEKKEFVCRWVDCSREQKPFKAQY MLVVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDAYPRPP PQPREPGSNGQGRSPGQLGFADQRDYNHATSKQDECLQVKSIKSEKPMTSQPSPGGQSAC GGEQSPGGGPPGRGVQLVVSAVRLQGEGERARGDEEDEEEEEGDQNQALIMDATVSTATL ALQARRSVGRPLRWMEQVKMERLRQVNAAPAGLAHLSPMPPVKGHSLPTILGKGSCLGHG DYRGVTLPQPAICPETCGTELTVLSLLGKGRRDSNESAASTGYLTCSRRSSGISPCFSSR RSSQASQSEVNTHRCRHNLSSTDSYDPISTDASRRSSEASHHGGGSSMGGGAMPGVGWGV GGGGGGDGGGGGHRGSGGGGGSRGGGVLSLTPAQHYHLKAKYAAATGGPPPTPLPNMEPA SLRSRMPLMGDAQDGSNPPLPPLVRPRRCSDGSANGYSTHNSYRHRGLYPGEGMLSTNRR ASDPVRTVHTQDPDGGLHQMLHFSSLNNMHPLPPLSNQHIHQGEARHVSLHHHHHTRSEG NLQRSLHSPCPPRIEEHSALEDLAMEDDGGLLLGYEDMLPDDLLQYIRSQEQEALYRQSQ NHNGDLHLPHNNGTGGDVDLLQVNPAGQQQQQAAEGEGIGGDEQPIQWNEVSSGSAHLSP ARQQPAQQPCGRWSERGVVAGRSPFGQFGNMVVQQQQQSQLPADLFAQPRGGDTGSANPI NSYRYPICSLSSSRRSSASRLPQLQACQLNAGVKSESSNASCLESRRNSSSTQVFGRAPD FSQISLGPIRQSCGQQQQQQQHFQPSQPAAQLIGNNLLLQRSSQDGLSHGSLLRPHPPAS LQPNGSSCRSSTRPQQHLTGGNHVGSCQQQPQHSSRNGSTAHCSLAGHISGLKIEAQDQA SSCSSLQQQQQQQRQAGFFQPGFGDCREAFDPSEAKPLSLPSTEERERCLIETQASPPGA QSDAPSAPLLSPGADQVTSTVDGSPSCEVLDNVGLDFTPILEDNFDQGSLVSDVISASVF QGMSRTSSRLTTPRASAAFASVPSGVNNMAIGDMSSLLSTLAQESRFLAIMQ NT seq 5019 nt NT seq  +upstreamnt  +downstreamnt atggaaacccagtcccaggccagttctgcagctgagaagaagaaaagggtggagaccatc gtggcgaccaagagcgcgtccgtacgcagtgacatcagcgagaaggctgtcgcctccagc accacctccaacgaagatgagagttctgtgccgacgtaccaccaccgcgagcggcgcaat gccctcagcgcccacaaccctgcggcgggcaccgcctcgggcaagctgagcgaggagcca tccacctccacggaggagcgcccccacctggtcaagaaggagctgcacagctcgctgccc cacctggctgaccacgccctgccctaccgtgggacgctcttcgccatggacccccgcaac ggttacttggaccacccttacgcccctcctcaatttttcccagccttccatcctccagtg cccatcgatgacagacacacgcaaggtcgctatatctacgagcactctcctgttccccct ctacacgtgcctcctgtgctggcgggcagcccggcgttctccgacatctccctcatccgc atctcgccccaccggaacccgtcagtgggggccgactctcccttcaaccctccccacccc tacatcaacccctacatggagtacatccgctcgctgcccggcagcccctcgctctccatg atctcagccgccaggggcctcagccccgcagatgccccccacacaggcctgaccacagcg gagtactaccaccatatggcgctccttgcgggccaccgtagcccgtatgctgacatcatc ccctccgtggcctccactgctggagcaggaagcaacgcgttgcacatggactacctgcaa gctgttgagggctctcgtttctccagtccgcgggtcccccagaggcccaggaagcgtgcc ctgcccatctccccgctctctgaccccggcttcgacctgcagaccatgatccgcacctcc cccaactccctggtcaccatcctcaacaactcccgctccagctcctccaccagcggctcc tacggacacctctctgccggggccatcagtcctgcgctgagcttcgcctacccacccacc ccagtggcgctgcagatgcaccagcagctgattggccggcagccaggcctcgtgagctcg gcgttcgggcacagcccgcccctcatccacccctcgcccgccttcgccacccagcgcccg gtgcctggcatcccctccgctggcttggcacccagcgagagatccgtggcctctagtgaa gcccagagtaagcccaccagcgagtctgcggtgagcagcacgggagaccccatgatgcac cacaagcgctccaaactcaagcctgacgaggagccgcccagcccaggggcaggtagcgtc caggagcagccggatggaatgacgctggtgaaagaagagggggacaaagacgagggcaag caggagccggaggtggtgtacgagaccaactgccactgggagggatgctgccgcgagttt gacacccaggaacaactggtgcatcacattaataatgaccacatccacggggagaagaag gagtttgtttgccgctgggtggactgttcccgggagcagaagcccttcaaagcccagtac atgcttgtagttcacatgagacggcacactggagagaagcctcacaagtgcacctttgag ggctgcgctaaagcctactcccgcctggagaacctgaagacccacctgcgctcacacact ggagagaagccatatgtgtgtgagcatgagggttgcaacaaagctttctccaacgcctcc gaccgtgccaaacaccagaaccgcacacactccaatgagaaaccgtacgtgtgtaagatc cctggctgcactaagcgctacacggaccccagctcgctacggaaacacgtgaagaccgtg cacggccccgaggcccacgtcaccaagaagcagcgcggcgacgcctacccccggcctcca cctcagcctcgagagccgggcagcaacggccagggcaggtcgccggggcaactggggttt gcagaccaaagggactacaaccatgctacctcgaaacaggacgaatgtctgcaggtcaag tctatcaagtcggagaagcccatgacgtctcagccaagccctggcggtcagtctgcatgc ggcggtgagcagtcccccggcggcggccctcccggccgtggagtccagcttgttgtgagc gccgtgcggctgcagggggagggggagcgtgcccggggggacgaggaagacgaggaggag gaggagggggaccagaaccaggccctcatcatggacgccacggtgtccacggcaacgctg gcactgcaggctcggcgcagcgtgggccggccgctccgctggatggagcaggtgaagatg gagcggctccggcaggtgaacgccgccccggccggcctggcgcacctatcccccatgccc ccagtcaaaggccacagcctgcccaccatcctggggaagggttcgtgcctgggccacggt gattaccgaggggtcactctaccccagcctgccatctgtcccgagacgtgcgggacggag ctgacggtgctcagcctgctgggcaaggggcggcgggacagcaacgagagcgcggccagc acgggctacctgacctgcagccgccgctcctccggcatctcgccctgcttctccagccgc cgctccagccaggcctcgcagtcggaggtgaacacccaccgctgccgccacaacctgagc tccaccgactcctacgaccccatctccaccgacgcctcgcgccgctccagtgaggccagc catcacggcggcgggagtagcatgggcggaggagccatgcctggggtcggatggggtgtc ggaggaggaggaggaggagacgggggcgggggaggtcacaggggttcgggaggaggtggt gggtccagaggaggaggtgttctgagcctcacgccggcgcagcactaccacctaaaggcc aagtatgccgccgccacgggtggacctcccccgacgccactgcccaacatggagcccgcg agcctgcgctcccgcatgcctctgatgggagacgcacaggatgggagcaaccctccactg cccccgctggtcagaccgcgccgctgcagcgatggaagtgccaatggttacagcacgcat aatagctaccgccacagggggctctacccaggggagggcatgctgagcaccaacagacga gccagcgaccccgtacggactgtgcacacgcaggaccccgacggcggcctgcatcagatg ctgcacttcagcagcctcaacaacatgcaccccttaccgcccctctccaaccagcacatc caccagggagaggccagacacgtgagtctgcaccaccaccaccacactcgctccgaaggg aacctgcagcgcagcctgcactccccgtgtccccccagaatagaggagcattcggcgctg gaggacctggccatggaggacgacggaggcctgctgctgggatatgaagacatgctaccc gatgacctattgcagtacattcgctcccaggagcaagaggctttgtatcggcagtcgcag aaccacaacggggacctccaccttcctcataataatggcaccgggggtgacgtagacctt ctccaggtgaacccagcgggtcagcagcagcagcaggccgcagaaggagagggcatcggc ggcgacgagcagcccatccagtggaatgaggtgagctcagggagcgcacacctgtccccc gccaggcagcagccggcccagcagccctgcggaaggtggtcggagcgcggcgtggtggcc ggccggagtccgtttggccagtttggcaacatggtggtgcagcagcagcagcagtctcag ctccctgctgatctcttcgctcagccccgagggggtgacacggggtcggcgaatcccatc aacagctacaggtatccaatctgtagtctgagttcctcccgcaggtcctccgcgtccagg ctccctcagctccaggcatgccagttgaacgccggcgtcaagtccgagtcatcaaacgcg tcctgtctagagagccggaggaacagctcgagcacgcaggtcttcggaagagcgcctgac ttctcccagatttcccttggtccaatccggcagagctgtggacagcagcagcagcaacag cagcacttccagcccagtcagcccgcggcacagctgatcgggaacaacctgcttctccag aggtcctctcaggatggcctctctcacgggtcactgctgcgtccacacccacccgcgagt ctccaaccaaacggcagcagctgtagaagctccaccagaccccagcagcacctgaccggt ggtaatcacgtcggctcctgccagcagcagccgcagcacagctccagaaatggcagcacg gcacactgctcactggctggacacatctccggactgaagatagaagctcaggaccaggcc agctcctgctcttcactgcagcagcagcagcagcagcaacgacaagcaggcttcttccag ccagggtttggagactgtagagaggcctttgacccgtctgaggccaagccgctgtccttg cccagcacagaggaacgggagcggtgcctgatagagacccaagcatctccgcccggggct caatcagacgctccctctgcccctctcctgtcccccggagcggaccaggtgaccagcacg gtggacggtagccccagctgcgaggtccttgacaacgtgggcctggacttcacccccatc ctggaggacaacttcgaccaaggcagcctggtgtcggacgtcatcagtgccagcgtgttc cagggcatgtcgcggacctcctctcgcctcaccacccctcgtgcctcagccgccttcgcc agtgtgccctccggggtgaacaacatggccatcggcgacatgagctcactcctctccacc ctcgcccaagagagccgcttcctggcgatcatgcagtag

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