Clupea harengus (Atlantic herring): 105912034
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Entry
105912034 CDS
T09045
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00071
Fatty acid degradation
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04148
Efferocytosis
char04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
105912034 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105912034 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105912034 (cpt1b)
03320 PPAR signaling pathway
105912034 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105912034 (cpt1b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
105912034 (cpt1b)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105912034 (cpt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
105912034
NCBI-ProteinID:
XP_031420516
Ensembl:
ENSCHAG00000006435
UniProt:
A0A6P8F968
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Position
3:complement(14194071..14212942)
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AA seq
779 aa
AA seq
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MAEAHQAVGFQFTVTPDGIDLHLSREVLRHIYLSGVTSWRKRAIRFKNGILTGVYPASPS
SWLIMVIAVLSTMYARGDPSLGTIDWIKEALPESDYLTAQTQTVVSAVVFATGLWLVLIM
LLRYTLKALLSHHGWIFECHGRKSFSTRVWLNVVRILSGRRPLLFSFQASLPRLPVPSVD
ETISRYLESVRPLLDDEQYKQMETVASEFKKGPAPKLQRYLKLKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYLMDLMYVTPTHRQAARAGNVIHAMLQYRRKLERGEHAPLRALGVV
PMCSFQYERMFNTTRIPGIDTDFVQHLSDRKHLVVYHRGRFYKVWLYYGGRHLWPSELEL
QFQRILNDPTPPQPGELKLAALTAGDRVPWARARLMYFSEGVNKTSLEAIETGAFFLTLD
DEAHGYDPEKLKSLDLYAKSLLHGKCYDRWFDKSFSLIAFKNGKMGVNVEHSWADAPIAG
HMWEYVLFTDSFQLGYTLEGHCKGDVNKGLAPPTRLQWDIPVACQEIIEGSYHLAKEIAD
DVDFHGYVFDEFGKGLIKKCRTSPDAFIQMALQLAHFRDKGEFCLTYESSMTRMFREGRT
ETVRSCTSESTAFVRAMEDLKQKKDECLALFQKASEKHQQMYRLAMTGSGIDRHLFCLYI
LSKLMGIDSPFLKQVLSEPWRLSTSQTPQQQINLMDLQKYPRYVGLGGGFGPVADDGYGV
SYIIVGEDIVTFHISSKFSSPETDSYRFGQNIRQAMLDIRSLFDQKNHTKIEKVVKKTL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcacatcaggccgtgggcttccagttcaccgtcacacctgatggcatcgac
ctgcacctgagccgagaggtgctccgacacatctacctgtccggcgtcacctcatggagg
aagagggccatcaggttcaagaatggcatcctgacgggtgtttaccctgccagtccgtcc
agctggttgatcatggtcatcgctgtcctgagcaccatgtacgcccggggcgacccgtct
ctgggaacgatcgactggattaaagaggccttacccgagagtgattacctgacggcccag
acgcagacggtggtgagtgcggtggtgtttgccacgggcctgtggctggtgctgatcatg
ctgctacggtacaccctcaaggccctgctctcacaccacggctggatcttcgagtgccac
ggccgcaagagcttctccaccagagtctggctgaatgtagtgaggatactttctggtcgg
aggcctttgctcttcagcttccaggcttcccttcctagactgcctgtacccagtgtggac
gaaaccatcagtaggtatttagagtcagtgcgccccctgctggacgatgagcagtataag
cagatggagacggtggccagcgagttcaagaagggcccggcgcccaaactacagagatac
ctcaagctcaagtcctggtgggccactaactatgtcagtgactggtgggaggagtatatc
tacttgagggggcggagccctatcatggtcaacagtaacttttatctgatggatctgatg
tacgtgacgcccactcacagacaggcagctcgagcggggaacgtgatccacgccatgctg
cagtaccgacgcaagctagaacgtggagaacacgcaccgctgagggccttgggtgttgtc
cccatgtgctcttttcagtatgagagaatgttcaacaccacgcgcatccccggcattgac
acagatttcgtgcagcacctgagcgaccgtaagcacctggtggtgtaccaccgcgggcgc
ttctacaaggtgtggctgtactacgggggccgccacctgtggccctcagagctggagctg
cagttccagaggatcctcaacgaccccacgccccctcagcccggggaactcaagctggcc
gcgctgaccgccggggacagagtgccgtgggctcgtgcccgtctgatgtacttcagtgag
ggggtgaataagacgtctctggaggccatagagacgggcgccttcttcctcacccttgat
gacgaggcgcatggatacgaccccgagaagctgaagtcacttgacctctacgccaagtct
ctgctgcacgggaagtgctacgacaggtggtttgataagtccttctctctgattgccttt
aagaatgggaagatgggtgttaacgtggagcattcatgggctgatgcacctatagcgggt
cacatgtgggagtacgtcttattcacagacagtttccagctgggctacactctggagggc
cactgtaaaggggacgtcaacaagggcctggccccgcccaccagactacagtgggacatt
cccgtggcatgtcaggagatcattgagggctcgtaccacttggccaaggagatagctgat
gatgtggacttccatggctacgtgtttgatgagtttggcaaaggcctgatcaagaagtgc
aggaccagcccggacgccttcatccagatggccctgcagctagcacacttcagggataag
ggagagttctgtctgacgtacgagtcctccatgacgcggatgttccgtgagggtcggacg
gaaacggtgcgctcgtgcacctctgagtctaccgcgttcgtcagagccatggaggacctg
aagcagaagaaagacgaatgcctggcattgttccagaaggcgtcggaaaagcaccagcag
atgtaccggttggccatgacgggctcgggcatcgaccgccacctcttctgcctctacatc
ctctccaagctgatgggcatcgactcaccttttctcaaacaggtgctgtcggaaccatgg
aggctctcgaccagtcagaccccccagcagcagatcaacctgatggacctgcagaagtac
ccccgatacgtgggcctgggggggggcttcggcccggtggcagatgatggttatggtgtg
tcttacatcatcgttggagaagatatcgtcacattccatatctccagcaaattttccagc
cctgagacggactcctaccgttttggccagaacatccgccaggccatgctggacatccgc
tcactctttgaccagaagaaccacaccaagatcgagaaggtggtcaagaagactctgtaa
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