Clupea harengus (Atlantic herring): 105912047 Help Entry 105912047         CDS       T09045                                  Symbol ccdc88aa Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:char03037]     105912047 (ccdc88aa) Cilium and associated proteins [BR:char03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    105912047 (ccdc88aa) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N DDE_Tnp_1_3 Motif Other DBs NCBI-GeneID:  105912047 NCBI-ProteinID:  XP_031418084 UniProt:  A0A6P8F069 LinkDB All DBs Position 24:complement(3106179..3138793) Genome browser AA seq 1789 aa AA seqDB search MNLPDIKMGSEMLPTLEHFMLTPLVTWVKTFGYIGEKDGSVLSEYTELVDGYHLNKIIGE IEPKATSPRVKKADNEPSQRIQNLAVLVQHVKAYYQETLQQLIMMPLPNALVLGKNPFCE QSVEEMKKLLLLLLGCAVQCDRKEEYIEKIQMLDFGTKAAIASHIQEVTDSQDSVFDLHW LEVSDLCPEDLDTLSRSMAVHLRRLVDQRDQQLETIMELLQERESGYLTPTRTPSPGDPG GLHLPGFQQHLTVELADTKAKSRRLRQELEEKSEQLLDCRQELESMEAELRRVQQENMQL LTDARAARTYRDELDALREKALRADKLESEVGRYRDRLHNLEFYKAKVEELKEDNQVLLE TKAMLEEQLEGSRARSDKLHQLEKHSLQLQAKIHDMEEERASDRRRIEELLEENLFLEMA QKRSMEESQHLGWELEQLSKSSEGPEGSVPKSLDEEVAERACSRLLRLERENQTLRRTVE ELRGTREPSEEHKRDISHKVRMLMEENELLNRSISSLNQIEETSTEGSAEEDLRKSPPES RDVSDNNDNKRLVEQEELVEAEREAALREISEEVQHYLEERRNLQEKGDPSKFEEEEEER GSPGGLKRRSPELSLDNPEPSPLKPLSEASPLGQSPSISPARSSSSTNICRRSDSRSCCT TRDAENRRLASALENSARRLRRLEGELRELEAENQTLQRALEELRLAGRRLERLEANGQA LEQEAAQLERDKGRLEKENRRLRQRAEVQEASLDASALRQASLEKENRTLGKELEALREA GARVKELEMESREMLKQTAIDQRTLSTLREELVSEKLKCQQRDSEVKRLTQEMERMGYKQ QQQQQDPLSADLLHVDNSRYKQLESELESSLKRCVEIKEEKMAALEARLQESSSLNHQLR QELRSVKLSYEALLQRQEEEECAGVGGRGSGSAQGEGSVREWQRESQEVTRELLRVKDRL IDVERNNATLQAERQALQTQLLQLQAQTDGLRAQVLALQRQTASLQESNTTLQTQNAQLQ VEKSTLNSQSAALLAENAQVQRQQFSAESERDGAVRDREDLRTVNELLLRDHERLAALHE RQAAEYEALIMRHGGLKSQHRSLELDHHALEDRYNTLLQQKTHLEVLEKALREEQQQLQQ ERVTLRSTTSECQRLRDEKDWLNQTYQKLLRENEELQTEHKSMKSLLNASRLEQTRLETD LSKLREQHQQLDITSTKLNNQCELLTQLKKNMEEENRHLVDQIQTLMLQNRTLLEQTVES KDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRGNWIALKMRKLIKSRS RERDRDHDQDQERGRDRIRSLTPTRSESCEGLPCHDNGSFVSSHGSAESAANSLDDNLSP KRSNIAVLKMFPLMRNRQKEKDKVRSFFRRSLSKNYAEDVARTSQGSNDERQSRGGLNST QSESSGEFSLENEGWSSGSSPAQCAPSRRGSDCSHVPPAATSTPTQASAPPKPPRDGAAL ESYASGRGVWRSSSGRATGPRGVLSQTQTQTFRTVAISIEGSRAAGASPPPPEVQVQDKP SGAAGCLDCFSAPLRREAQGEGQGGQSRGGRGQGRVARAFSTLPRASSVISTSEGSIRRA SFHSMMSKSATPSPHKPTTDKNLNLTTNLTANPTSVLGEPGGESSAAPPRAEAPEGSLEP PLFGYPFTLDSVFTNTIFSESSLVSSGGNSQTFLCLNPALVHNISGPPLTGPLPFEEAQE LVDLHMEQDEAQEGEAGQGPQDCSTSEDYMTVTEKSASLAPDNKHSLMA NT seq 5370 nt NT seq  +upstreamnt  +downstreamnt atgaatttacccgatataaaaatgggaagtgagatgctgcccacactggagcatttcatg ctaaccccccttgtcacctgggtgaagacatttgggtacataggtgagaaggatggcagt gtactttcggagtacactgagttagtggatgggtaccacctgaacaagattataggggaa atagagcccaaagccaccagtccgagggtgaagaaagcagacaacgagccgagccagagg attcagaacctggcggttctggtgcagcatgttaaagcctactaccaggagactctacag caactgatcatgatgcctcttcctaatgcgctggtgctgggcaagaaccctttctgtgag caaagcgttgaggaaatgaagaagctgttgctgctgttactaggatgtgctgtgcagtgt gaccggaaagaggagtacatcgagaagattcagatgctggactttggcactaaggcagcc atagcatcccacatccaagaggtcactgacagtcaggacagcgtgtttgacctgcattgg ctggaggtcagcgacctttgccctgaagacctggacaccctctccaggagcatggctgtg cacctccgcaggctggtggaccagcgagaccagcagctggagaccatcatggagctgtta caggagagggagagcggttatctgaccccgaccaggaccccgtcccctggggaccccggg ggccttcacctgcccggctttcagcagcacctgaccgtggagctggccgacaccaaggcc aagagccgacgcctccgacaggagctggaggagaaaagcgagcagctgttggactgcagg caggagctggagagtatggaagctgagctgaggagagttcagcaggagaacatgcagctg ctgacggacgcgcgagcggcgaggacataccgggatgagctggatgccctgcgggagaag gcgctccgagccgacaagctggagagcgaagtgggccgctaccgcgaccgcctccacaac ctggagttctacaaagcaaaagtggaggagctgaaggaggacaaccaggtgctgctggag actaaggccatgctggaggagcagctggaggggtccagggcgcgctccgacaaactccac cagctcgagaaacacagtctgcagctgcaggccaagatccacgacatggaggaggagcga gcgtcagaccggaggcgcatcgaggagctgctggaggagaacctgttcctggagatggcc cagaagaggagcatggaggagtcacagcaccttggctgggagctggagcagctcagcaaa tcctcagagggaccggagggctcagtgccgaagtctctggatgaggaggtggctgagagg gcctgtagccgcctgttgaggctggagagggagaaccagaccctgcgcagaaccgtagaa gaactcagaggaaccagggaaccttctgaagaacacaagagagatatatcacataaagta aggatgctgatggaggagaatgagctcctgaacagaagcatctcctccctgaatcagatt gaggagaccagcactgaaggttctgctgaagaagacctgaggaaatcacccccagagtct agagacgtcagcgacaacaatgacaacaagaggctggtggagcaggaggagttagtggag gctgagagggaggcggcattgagggagatttctgaggaggtgcagcattatctggaggag aggaggaacctgcaggagaaaggagatccatccaagtttgaggaggaagaagaagagagg ggatctccaggaggtctgaagagaagaagcccggagctcagccttgacaacccagagccg tcccccctcaagcccctctccgaggccagcccgctgggccagagcccgtccatctccccg gcccggtcctccagctccaccaatatctgccgccggtccgattctcgctcctgctgcacc acgcgtgacgcagagaaccggcggctggcctcggcactggagaactcggcgcggcgcctg cggcgcctggagggggagctccgcgagctggaggccgagaaccagacgctgcagcgggcg ctggaggagctgcgtctggccgggcggcgtctggagcgcctggaggccaacggccaggcc ctggagcaggaggcggcccagctggagcgcgacaagggccgcctggagaaggagaaccgc aggctgaggcagcgggccgaggtgcaggaggcctcgctggacgccagcgcgctcaggcag gcctccctggagaaggagaaccgcaccctggggaaagagctggaggcgctcagggaggcc ggagccagggtgaaggagctggagatggagtccagggagatgctgaagcagacggccatc gaccaaaggactctgagcacactgagggaggagctggtgagtgagaagctgaagtgccag cagagggatagtgaggtgaagagactcacacaggagatggagagaatgggctacaaacag cagcagcagcagcaggatcctctatctgcagacctgctgcatgttgataacagtcggtat aagcagctggagtctgaactggagtcgtctctgaagaggtgtgtggagattaaagaggag aagatggctgctctagaggcccgtctacaggagtcctccagcctcaaccaccagctgcgg caagagctccgctcagtaaagctgagctatgaggcactgctgcagaggcaggaggaggag gagtgtgcaggagtgggtgggcgtggctcaggctccgcccagggggagggttcagtcaga gagtggcagcgggagagccaggaggtcactcgtgagctgctcagggttaaggaccgcctt atcgatgtggagaggaacaatgccaccctgcaggcggagcggcaggccctgcagacgcag ctgctgcagctgcaggcgcagacagatggcctgcgcgctcaggtcctggccctgcaacgg cagaccgcctcgctgcaggagagcaacaccaccctgcagacacagaatgcccagctgcag gtggagaagtccacgttgaactctcagagcgccgccctgctggcggagaatgcgcaggtg cagcggcagcagttcagcgcggagagcgagagggacggggcagtgcgcgaccgcgaggac ctgcgcaccgtcaacgagctgctgctgcgcgaccacgagcgtctggcggcgctgcacgag cgccaggcggccgagtacgaggcactgatcatgcgccacggcggtctcaagagccagcac cgcagcctggagctggaccaccacgccctggaggacaggtataacacactgctgcagcag aaaacccatctggaggtgctggagaaggctctgcgagaggaacagcagcaactgcagcag gagagagtgacgctcaggagcaccacctcagagtgccagagactcagggacgagaaggac tggctgaaccagacctaccagaagcttctgagggagaacgaagagctgcagacggagcac aagagcatgaagagcctgctgaacgcctcccggctggagcagacacgcctggagaccgac ctctccaagctaagggagcagcaccagcaactggacatcacctccaccaaactcaacaat cagtgtgagctgctgacccagctgaagaagaacatggaggaggagaaccggcaccttgtg gaccagatccagacactgatgctacaaaaccggactctactggagcagaccgtggagagc aaggacctgttccacgtggagcagagacagtatatagacaaactgaatgagctgaggagg cagaaagagaaactggaggaaaagatcatggaccagtacaagttctatgacccctcaccc ccaagaagacgaggcaactggatcgcgctgaaaatgaggaagctgatcaagtctcgaagc cgcgagcgagatcgggaccatgaccaggaccaggagcgaggccgcgaccgcattcgctcg ctgacacccacacgctccgagtcgtgcgagggactcccctgccatgacaacggctccttc gtgagctcgcacggctcggccgagtcagccgccaactcgctggacgacaacctgtcgccc aagcgcagcaacattgccgtcctgaaaatgttccccctcatgcggaacagacagaaggag aaagacaaagtcaggtccttcttccgtcgttccctgtctaagaactatgctgaagatgtg gcccgtactagccaagggagtaacgatgaacgccagagtcggggcggtctgaacagcacc cagagcgagagcagtggtgagttcagcctggagaatgagggctggtccagcggcagcagc ccggcccagtgcgccccctcacgacggggcagcgactgctcccatgtaccccctgccgcc acctccacccccacccaagcctccgcgcctcccaaacccccccgggacggggcggccctg gagtcctacgcctccgggcggggggtgtggcgctccagcagcgggcgagcgacgggcccc cggggagtcctgagccagacacagacccagaccttccgcacggtggccatctccatcgag ggcagcagggcggctggcgccagcccaccaccaccggaggtccaggtccaggacaaaccc tccggcgccgccggatgtctggactgcttctcagcgccgctgaggagagaggctcaaggc gaaggtcagggggggcaaagtcgtgggggtaggggtcaaggtcgggtggcacgggccttc tccacgctcccgcgcgccagtagcgtcatctccacctctgagggctccatccgccgcgcc agcttccacagcatgatgtctaagtcagccacaccctcgccccacaagcccaccacagac aagaacctcaacctgaccacaaacctgaccgccaaccccacctctgtgctcggtgagccg ggaggagagtcctccgcagcacccccccgcgcagaggcccccgagggctccctggagccc cccctcttcggctaccccttcactctggactcggtcttcaccaacaccatcttcagcgag tccagcctggtcagcagtggaggcaacagccagaccttcctctgcctcaacccggctctt gtccacaacatcagcggccccccgctcacgggccctctgccctttgaggaggcacaagag ctggtcgacctccacatggagcaggacgaggcccaggagggagaagcagggcaggggcca caggactgctccaccagtgaggactacatgacggtcacggagaagtcagcctcactcgcc cccgacaacaaacactccctgatggcgtaa

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