Clupea harengus (Atlantic herring): 105912062
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Entry
105912062 CDS
T09045
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105912062
Cell adhesion molecules [BR:
char04515
]
Cadherins
Cadherin related
105912062
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
SP_C-Propep
Motif
Other DBs
NCBI-GeneID:
105912062
NCBI-ProteinID:
XP_031428783
UniProt:
A0A6P8FKJ1
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Position
9:<27725570..27760969
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AA seq
930 aa
AA seq
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SVNKHKPWIETSYHGVITENSDVVVLDPPLVALDKDAPIPYAGEICGFRILGLDVPFEAV
VLNETSGEGQLQAREPIDCERQKEFSFLIQAHDCGAGPGGPIGKKSHKAVVHVQVDDVNE
FSPVFSRSEYRADVTEGRVYDVILQVQASDQDCSPQYSQICNYHILTKHTPFAIDRNGNI
RNTERLSFEEQALYELQVTAFDCGQRESSHSVAVYISVKPVCKPGWQGWSKRVDYEPGMG
SKQLFPSMHLETCGWSLSSVRIMVELQTTHIGKGCDRETYSEKALQRLCGASSGSTDLLP
APSLSTNWTAALVTEGGREGDLIFRFDGRQAAKVPDWVAPGNLTDQFTIATWMKHGPSPG
QRADKETLLCNSDKTEMNRHHYSLYVHNCRLVFLLRRDDSLTDSFRPAEFHWKLEQICDK
EWHYYVINVEFPMVTLYVDGVTYDPYLVTDDWPIHSSHIDLQLTVGACWQGGEVSKRRFT
QYFRGSLSGLTLRPGKIETRKVISCLQACKEGLDISSLQSLGKAIKFHFNPSQSLLVMEA
EDVQRVSGALRKVSYINSRQFPTPGVRRLRLASSVQCFSEDECISIPDIESVVMVMQPSE
PRITITGAEHVTSPASDVKGVAGLRLFPDLHISTVTAGNRPSNSAANGHRTGVLEESIHN
LDYCDILVLGEELKTGQESLQLHRSFLLATHLECTNSTTGMSIYGVDSMVNYAEVMRHVY
YQNRQPEISVRNFRLTCSELNGRYTSNQFSLEVNILHSLEAAEHANHMMAPPPFTQVVHH
PLMLRAADSSGVPSLAGLVLLVCVVVLVVVMVVGAYRIHVTLRQDNGSTHTLTHTGQLWD
ESALTITVNPMESFQEALAAVGELTDDEEEDDDEEEADDGDENDEDDDDEEDDDITSVES
DSEGDGEDLTTMQPASWRRAQQDWDNMAPF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
tcagtgaacaagcacaagccgtggatagagacgtcctatcatggtgttatcacagagaac
tccgatgtcgtcgtgctggaccctccgcttgtggcgctggacaaggatgcccccatcccc
tatgcaggagagatctgtgggttccgtatcctcggcctggatgttccgttcgaggcagtg
gttctgaacgagacgtcgggggaggggcaactgcaggcccgggagccaatcgactgtgag
cgccagaaggagttttccttcctcatccaggcccatgactgcggagctggaccaggaggg
cccatcggcaaaaagtctcacaaagcagtggtacatgtccaggttgatgatgtaaacgag
ttctctcccgtcttctcgcggtcggagtaccgtgccgatgtcacggaggggcgtgtctat
gacgtcatccttcaggtgcaggccagcgaccaggactgttccccgcagtacagccagatc
tgcaactaccacatcctcaccaaacacacaccctttgccatcgaccgcaatggaaacatc
cgtaacacggagcgtctgagcttcgaggagcaggccctgtatgagctgcaggtgacggcc
ttcgactgcggccagcgggagtcctctcacagcgtggccgtctacatcagcgtcaagcct
gtctgcaagccaggatggcagggttggagcaagcgtgttgactatgagccaggcatgggc
agcaagcagctctttcccagcatgcacctggagacgtgtggctggagcctgtcgtccgtg
cggatcatggtagagctgcagaccacacacatcgggaagggctgcgaccgtgagacctac
tccgagaaggccctccagagactctgtggggcatcctcaggcagcactgatctgcttccc
gctccaagtctgtccaccaattggactgctgcgttggtgacagagggagggcgggaaggt
gacctcatcttccgctttgatggacggcaggcagcgaaggtccctgattgggtggcgccg
ggcaacctgacggaccagttcaccatcgccacctggatgaagcacggacccagcccaggc
cagcgcgcagacaaggagacactgctgtgcaactcagacaagacagagatgaacagacac
cattactctctgtatgtgcataactgtcgtctggtgtttctgctgcggcgggacgacagc
ctcacagactccttcagaccagcggagttccactggaaactggagcagatctgtgataaa
gagtggcattattatgtcatcaatgtggaatttcccatggtgacactctatgtcgatgga
gtgacctatgacccctacctggtgacagacgattggccgattcactcctctcacatagac
cttcagctgactgtgggagcctgctggcaaggtggagaggtcagtaagaggaggtttact
cagtacttccggggcagtctgtctggcttgaccctgcggccaggaaagattgagacgcgt
aaggtcatctcctgcctgcaggcctgtaaggagggactggacatcagctctctccagagc
ctggggaaggccattaagttccacttcaacccgtcccagtctctgctggtgatggaggca
gaggatgtgcagcgtgtgagtggtgccctgaggaaggtgtcctacatcaactcacgccag
ttccccacacctggtgttcgacgcctcagactggcctcatcagtacagtgtttcagtgag
gatgagtgcatctctattccggatattgagtcggttgtcatggtgatgcaacccagtgag
ccccgcattaccatcacaggggcggagcatgtgactagccccgcctctgatgtgaagggc
gtggccgggctgaggctgttccctgacctgcacatcagcactgtaaccgccggcaacagg
cctagcaacagtgctgctaatggccacaggaccggtgttctggaggagagtatccacaac
ctggactactgtgatattctggtgctgggggaggagcttaagacagggcaagagagtctt
cagctgcacaggagcttcctattggccacacacctggaatgtaccaactccaccacgggg
atgtccatatatggtgtggactccatggtgaactacgcagaggtgatgaggcacgtgtac
tatcagaaccggcagccggagatctctgtgcggaacttccgcctcacctgctccgaactc
aacggccggtacacctccaaccagttcagcctggaggtcaacatcctgcacagcttagag
gctgctgaacatgccaatcacatgatggccccgccccccttcacacaggtggtccatcat
cctctcatgctccgtgctgctgacagctcaggcgtgcccagtctagcgggtctggttctg
ctggtgtgtgtggtggttctggtggtagtgatggtggtgggggcgtacaggatccacgtc
acactccgtcaggacaacggcagcacacacacactcacacacacgggtcagctctgggac
gagtccgcactcaccatcacagtcaaccccatggagagttttcaagaggccctggctgca
gtaggagagctcactgacgatgaggaggaagatgatgacgaagaggaggccgatgatggt
gatgagaatgatgaggatgatgatgatgaagaagatgatgacatcactagtgttgagtct
gacagtgaaggggatggcgaggatttaaccaccatgcaaccggcgagctggaggagggcc
cagcaagactgggacaatatggcacctttctga
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