Clupea harengus (Atlantic herring): 105912084
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Entry
105912084 CDS
T09045
Symbol
atl3
Name
(RefSeq) atlastin-3
KO
K17339
atlastin [EC:3.6.5.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105912084 (atl3)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105912084 (atl3)
Autophagy
ER-phagy
ER-phagy recepters
105912084 (atl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Oleosin
Septin
Motif
Other DBs
NCBI-GeneID:
105912084
NCBI-ProteinID:
XP_012696460
Ensembl:
ENSCHAG00000007673
UniProt:
A0A6P3WED3
LinkDB
All DBs
Position
20:3918363..3929104
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AA seq
511 aa
AA seq
DB search
MGSEPCSVQIVRVNKEDHSFDLDTEALEKVLLAPEVRDKHVVVLSVAGAFRKGKSFLLDF
MLRYMRRRNEEDWLGQDNDELTGFSWRGGSEPETTGIQLWSEVFLVDKSDGTQVAVLLMD
TQGAFDNQSTVKDCATIFALSTMTSSMQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFL
KPFQSLMFVIRDWSFPYEYKYGLSGGREFLDKRLQVKETQHEELQTVREHIHSCFTSISC
FLLPHPGLKVATSPSFKGQLSDVAPEFKEELCNLIPSLLKPDALAEKEINGTKVTCRGLV
EFFKAYIKIYQGEDLPHPKSMLMATAEANNLAAVAAAKDQYYKNMEKVCGGDLPYVAPTS
LEEKHKFCLNDALHLFTATKKMGGQEFCDRYQAQLHAELEELWTSFSKHNESKNVFSAFR
TPAVLFVLVCLLYVLSGILLFIGLASVSFACDCALGVSMLSMLTWAFIRYSGQYHGVGTA
IDQAAGVLLEQATVVLNKSRGPPALQEKKSS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgagccttgctcagttcaaatagtccgggtaaataaggaggatcactccttt
gaccttgacactgaggccttggagaaggttcttcttgccccagaggtccgagacaagcat
gtagtcgtgctgtccgtcgctggggccttccgtaagggcaagagctttcttctagacttc
atgcttcggtatatgcgcaggaggaacgaagaggactggttgggacaggataatgacgaa
cttaccgggttctcctggagggggggttcagaacctgagaccacaggcatccagctgtgg
agcgaggtgttcttggtggacaagagtgacggcactcaggttgctgtgcttctaatggac
actcagggtgccttcgataaccagtccacagtgaaagactgcgctacaatctttgccctc
agcacaatgaccagctccatgcagatctacaacctctcacagaacatccaggaagacgac
ctccagcagctccagcttttcacagagtatggtcgtcttgcaatggacgaaatcttcttg
aagccctttcagtccctcatgttcgtgattcgagactggagcttcccctatgagtacaag
tacggcttaagcggagggagggagtttctggacaaacgactgcaggtcaaggagactcag
catgaggaattgcagacagtgagagagcatattcattcctgtttcacctcaatttcctgt
ttccttttaccacatcctgggttaaaagtggccaccagtccttccttcaaaggccaactc
agtgacgtggcacctgagtttaaagaggagctgtgcaacctaatcccctcactgctgaag
cctgatgcgctggccgagaaagagatcaacggcaccaaggtgacctgccgaggcctggtc
gagttctttaaggcgtacatcaagatctaccagggcgaagacctgccacacccaaagtct
atgctgatggctacagcagaggccaataaccttgcagctgtcgctgcagccaaagaccaa
tattacaagaacatggagaaggtatgtggaggagacctgccctacgtcgcccctacctca
ctggaggagaagcacaagttctgtctcaatgatgccctccatctcttcaccgccactaag
aagatgggaggccaggagttctgcgaccgctaccaggcccagctgcacgccgaactggag
gagctctggacttccttcagcaaacacaatgagtcaaagaacgtcttcagtgcattccga
acgcctgccgtgctttttgtccttgtgtgcctcctgtacgtgctgtctggtatcctgctc
ttcatcggcctggcttctgtttcgtttgcgtgtgactgtgccctgggtgtgtccatgctc
tccatgctgacctgggcgttcatccgctactcaggccaataccacggggtgggcactgcc
atagaccaggcagcgggagtgttactggagcaggctactgtagtgctgaacaagtcgaga
ggtccccccgcccttcaggaaaagaaatcaagctag
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